RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 ATXN2LQ8WWM7 1075 aaKnown RBP12.1□□□□□ -0.47
LINC01238-202ENST00000426962 ZNF689Q96CS4 500 aaPredicted RBP12.1□□□□□ -0.47
LINC01238-202ENST00000426962 MAP7D2Q96T17 732 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 PRDM6Q9NQX0 595 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 VAV3Q9UKW4 847 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 ST3GAL5Q9UNP4 418 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 AKT3Q9Y243 479 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 UNC80Q8N2C7 3258 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 MYH9P35579 1960 aaKnown RBP12.09□□□□□ -0.47
LINC01238-202ENST00000426962 FAM205CA6NFA0 338 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 DGKIO75912 1065 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 QARSP47897 775 aaKnown RBP12.09□□□□□ -0.47
LINC01238-202ENST00000426962 FOSBP53539 338 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
LINC01238-202ENST00000426962 EPHA7Q15375 998 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01238-202ENST00000426962 MTERF2Q49AM1 385 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 IL27Q8NEV9 243 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 GDPD5Q8WTR4 605 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 LINC01599Q8WXQ3 324 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 OSMRQ99650 979 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 ADAMTS10Q9H324 1103 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 RGS18Q9NS28 235 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-202ENST00000426962 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-202ENST00000426962 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
LINC01238-202ENST00000426962 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 H3BNC9 293 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 MAFO75444 373 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 RB1P06400 928 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 SARSP49591 514 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 DNM2P50570 870 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 MRPS5P82675 430 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 BTG3Q14201 252 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 RABEP1Q15276 862 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 SKIV2LQ15477 1246 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 SLC24A5Q71RS6 500 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 ANO5Q75V66 913 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 FAM228AQ86W67 206 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 C8orf76Q96K31 380 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 CEP89Q96ST8 783 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 ADAM2Q99965 735 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 UPF2Q9HAU5 1272 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 RC3H2Q9HBD1 1191 aaKnown RBP12.08□□□□□ -0.48
LINC01238-202ENST00000426962 C1orf112Q9NSG2 853 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 THEGQ9P2T0 379 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 LRFN2Q9ULH4 789 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 RWDD3Q9Y3V2 267 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
LINC01238-202ENST00000426962 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 C5orf67F2Z3F1 127 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 MGEA5O60502 916 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 BMPR1AP36894 532 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 GPC3P51654 580 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 FAM189BP81408 668 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 GUCY1B3Q02153 619 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 SPIRE1Q08AE8 756 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 GPM6BQ13491 265 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 CALCRLQ16602 461 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 PTPROQ16827 1216 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 NCAPH2Q6IBW4 605 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 FAM184AQ8NB25 1140 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 FBXO18Q8NFZ0 1043 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 EVPLQ92817 2033 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 CLP1Q92989 425 aaKnown RBP12.07□□□□□ -0.48
LINC01238-202ENST00000426962 ASB2Q96Q27 587 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 FOXP1Q9H334 677 aaPredicted RBP12.07□□□□□ -0.48
LINC01238-202ENST00000426962 ZSWIM4Q9H7M6 989 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 CYP26B1Q9NR63 512 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 PPME1Q9Y570 386 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 SIP14410 1827 aa12.07□□□□□ -0.48
LINC01238-202ENST00000426962 TTC3P53804 2025 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 C9IYK1 514 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 ST18O60284 1047 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 NEMFO60524 1076 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 SLITRK3O94933 977 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 LINC00271P0C7V0 271 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 DARSP14868 501 aaKnown RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 DRP2Q13474 957 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 DSC3Q14574 896 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 TPH2Q8IWU9 490 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 CMTR2Q8IYT2 770 aaKnown RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms