RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 MAPK13O15264 365 aa19.23■□□□□ 0.67
ARHGEF28-203ENST00000426542 CRKP46108 304 aa19.23■□□□□ 0.67
ARHGEF28-203ENST00000426542 TTC17Q96AE7 1141 aa19.23■□□□□ 0.67
ARHGEF28-203ENST00000426542 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-203ENST00000426542 POTEMA6NI47 508 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 PPP1R12AO14974 1030 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 SFR1Q86XK3 245 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 NDUFAF2Q8N183 169 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 HEMGNQ9BXL5 484 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 KLHL8Q9P2G9 620 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 CNOT8Q9UFF9 292 aaKnown RBP19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 CCDC151A5D8V7 595 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 ZBBXA8MT70 800 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 CLDN3O15551 220 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 STRBPQ96SI9 672 aaKnown RBP19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 TRIM15Q9C019 465 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 ABCB11O95342 1321 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 TRIM49BA6NDI0 452 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 RMDN2Q96LZ7 410 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 PI4K2BG5E9Z4 385 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 TOGARAM2Q6ZUX3 1019 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 GIPC2Q8TF65 315 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 CEP72Q9P209 647 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 ZBTB5O15062 677 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 C21orf2O43822 256 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 DRP2Q13474 957 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 STXBP2Q15833 593 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 ZNF699Q32M78 642 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 VPS39Q96JC1 886 aa19.22■□□□□ 0.67
ARHGEF28-203ENST00000426542 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 DGKHQ86XP1 1220 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 NPHP4O75161 1426 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 PFDN1O60925 122 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 TTLL6Q8N841 843 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 SUDS3Q9H7L9 328 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 MOSPD1Q9UJG1 213 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 COPEO14579 308 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 ASNSP08243 561 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 ARL4CP56559 192 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 TNFAIP2Q03169 654 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 NUGGCQ68CJ6 796 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 RMDN3Q96TC7 470 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 RAD54LQ92698 747 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 FSD1LQ9BXM9 530 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 SCOCQ9UIL1 159 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 PALLDQ8WX93 1383 aa19.21■□□□□ 0.67
ARHGEF28-203ENST00000426542 PODXLO00592 558 aa19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 NR3C1P04150 777 aa19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 ARHGDIAP52565 204 aa19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMPRSS15P98073 1019 aa19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 SPATA17Q96L03 361 aa19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 UPF3AQ9H1J1 476 aaKnown RBP19.21■□□□□ 0.66
ARHGEF28-203ENST00000426542 GOLGA8MH3BSY2 632 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 GCLMP48507 274 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 PAPOLAP51003 745 aaKnown RBP19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 GPC3P51654 580 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 TBC1D10CQ8IV04 446 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 IFT43Q96FT9 208 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 RBM41Q96IZ5 413 aaKnown RBP19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ZBTB18Q99592 522 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ACTR5Q9H9F9 607 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 GJB4Q9NTQ9 266 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ASNSD1Q9NWL6 643 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 A0A0G2JND7 137 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 RNF219Q5W0B1 726 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 TTC30AQ86WT1 665 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 TTC30BQ8N4P2 665 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 FAM213AQ9BRX8 229 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 MMTAG2Q9BU76 263 aaKnown RBP19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 SNX24Q9Y343 169 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 HEY1Q9Y5J3 304 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 NCLNQ969V3 563 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 DYDC2Q96IM9 177 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 CYTH2Q99418 400 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 FEM1BQ9UK73 627 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ANKARQ7Z5J8 1434 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ERVK-7P63135 1459 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 SLC16A4O15374 487 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 KRT37O76014 449 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 CASP1P29466 404 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 NOP14P78316 857 aaKnown RBP19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 HLFQ16534 295 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ZNF568Q3ZCX4 644 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 PADI6Q6TGC4 694 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 ZBED2Q9BTP6 218 aa19.2■□□□□ 0.66
ARHGEF28-203ENST00000426542 SNX2O60749 519 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 SRGAP2O75044 1071 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 MAPK6Q16659 721 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 PFKFB3Q16875 520 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 PRPF38AQ8NAV1 312 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 ELAC2Q9BQ52 826 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 ERBB3P21860 1342 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 GLE1Q53GS7 698 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMEM270Q6UE05 265 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms