RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PI15O43692 258 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 EOMESO95936 686 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 PBX3P40426 434 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 STAT5BP51692 787 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 PLPPR4Q7Z2D5 763 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 RRP36Q96EU6 259 aaKnown RBP16.23■□□□□ 0.19
HDAC6-206ENST00000426196 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
HDAC6-206ENST00000426196 UBIAD1Q9Y5Z9 338 aa16.23■□□□□ 0.19
HDAC6-206ENST00000426196 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
HDAC6-206ENST00000426196 HIP1O00291 1037 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 CLASP2O75122 1294 aaKnown RBP16.22■□□□□ 0.19
HDAC6-206ENST00000426196 NPR3P17342 541 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 FAM189BP81408 668 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 SIX5Q8N196 739 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 TMEM40Q8WWA1 233 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 SDF4Q9BRK5 362 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 JADE2Q9NQC1 790 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 DUSP12Q9UNI6 340 aa16.22■□□□□ 0.19
HDAC6-206ENST00000426196 RFX1P22670 979 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 KLRC1P26715 233 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 SLC26A2P50443 739 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 TROAPQ12815 778 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 TDGQ13569 410 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 WTAPQ15007 396 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 SART3Q15020 963 aaKnown RBP16.21■□□□□ 0.19
HDAC6-206ENST00000426196 LRRC55Q6ZSA7 311 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 CATIPQ7Z7H3 387 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 FAM228AQ86W67 206 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 C12orf76Q8N812 135 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-206ENST00000426196 CASD1Q96PB1 797 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 CDHR5Q9HBB8 845 aa16.21■□□□□ 0.19
HDAC6-206ENST00000426196 C2orf16Q68DN1 1984 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 SPDYE3A6NKU9 549 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 STK25O00506 426 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 HBP1O60381 514 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 KRT37O76014 449 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 CRYBB1P53674 252 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-206ENST00000426196 ACTR2P61160 394 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 ZC3H14Q6PJT7 736 aaKnown RBP16.2■□□□□ 0.18
HDAC6-206ENST00000426196 CCDC149Q6ZUS6 474 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 OTOP3Q7RTS5 596 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 KIAA0319LQ8IZA0 1049 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 CYP2W1Q8TAV3 490 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
HDAC6-206ENST00000426196 NFASCO94856 1347 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 CFAP47Q6ZTR5 3102 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 COL1A2P08123 1366 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-206ENST00000426196 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 CXCL14O95715 111 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 KIZQ2M2Z5 673 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 CABP7Q86V35 215 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 TMEM169Q96HH4 297 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 PPP1R16BQ96T49 567 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 OSMRQ99650 979 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 KCNH7Q9NS40 1196 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 RNF19AQ9NV58 838 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 R4GN57 208 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 CACNA1IQ9P0X4 2223 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 GPR179Q6PRD1 2367 aa16.19■□□□□ 0.18
HDAC6-206ENST00000426196 MAP1BP46821 2468 aaKnown RBP16.18■□□□□ 0.18
HDAC6-206ENST00000426196 EPCAMP16422 314 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-206ENST00000426196 ALDH7A1P49419 539 aaKnown RBP16.18■□□□□ 0.18
HDAC6-206ENST00000426196 GIT2Q14161 759 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 DSC3Q14574 896 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 TMC5Q6UXY8 1006 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 RALYLQ86SE5 291 aaKnown RBP16.18■□□□□ 0.18
HDAC6-206ENST00000426196 CTCFLQ8NI51 663 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-206ENST00000426196 RUBCNQ92622 972 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 CNTNAP3BQ96NU0 1288 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 CNTNAP3Q9BZ76 1288 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 DLL3Q9NYJ7 618 aa16.18■□□□□ 0.18
HDAC6-206ENST00000426196 BACH1O14867 736 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 KIF5BP33176 963 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 METAP2P50579 478 aaKnown RBP eCLIP16.17■□□□□ 0.18
HDAC6-206ENST00000426196 UBE2SQ16763 222 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 VPS52Q8N1B4 723 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 RNF169Q8NCN4 708 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 MRPL9Q9BYD2 267 aaKnown RBP16.17■□□□□ 0.18
HDAC6-206ENST00000426196 SFXN1Q9H9B4 322 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 KCNK12Q9HB15 430 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 IGSF9Q9P2J2 1179 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 PCDHA6Q9UN73 950 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 PCDHA8Q9Y5H6 950 aa16.17■□□□□ 0.18
HDAC6-206ENST00000426196 ARP10275 920 aa16.16■□□□□ 0.18
HDAC6-206ENST00000426196 SMARCA1P28370 1054 aa16.16■□□□□ 0.18
HDAC6-206ENST00000426196 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
HDAC6-206ENST00000426196 ECHDC2Q86YB7 292 aa16.16■□□□□ 0.18
HDAC6-206ENST00000426196 RIN2Q8WYP3 895 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-206ENST00000426196 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
HDAC6-206ENST00000426196 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
HDAC6-206ENST00000426196 LZTS2Q9BRK4 669 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms