RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 XKR3Q5GH77 459 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 MFSD14CQ5VZR4 134 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 PLPPR4Q7Z2D5 763 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
HPS4-204ENST00000422379 KCTD17Q8N5Z5 321 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 BSNDQ8WZ55 320 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 GLG1Q92896 1179 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 CEP170P1Q96L14 293 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 NIFKQ9BYG3 293 aaKnown RBP9.94□□□□□ -0.82
HPS4-204ENST00000422379 SLC39A2Q9NP94 309 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 PANK4Q9NVE7 773 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 FAM184BQ9ULE4 1060 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 TRIM17Q9Y577 477 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 PVALEFA0A1B0GWK0 134 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 GOLGA6L6A8MZA4 724 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 HIP1RO75146 1068 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 HMGCRP04035 888 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 INHAP05111 366 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 AKR1A1P14550 325 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 GUCY2CP25092 1073 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 CDC25BP30305 580 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 HOXD13P35453 343 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 ZNF131P52739 623 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 AMPD3Q01432 767 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 ZNF658Q5TYW1 1059 aaPredicted RBP9.94□□□□□ -0.82
HPS4-204ENST00000422379 SFR1Q86XK3 245 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 RAET1EQ8TD07 263 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 SH3TC2Q8TF17 1288 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 KCNF1Q9H3M0 494 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 IKBKBO14920 756 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 NKRFO15226 690 aaKnown RBP eCLIP9.93□□□□□ -0.82
HPS4-204ENST00000422379 SEPT4O43236 478 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 ADAMTS4O75173 837 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 DUSP11O75319 330 aaKnown RBP9.93□□□□□ -0.82
HPS4-204ENST00000422379 PPFIA4O75335 1185 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 CNGA1P29973 690 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 KCNA1Q09470 495 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 DRC7Q8IY82 874 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 ADSSL1Q8N142 457 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 TRIML1Q8N9V2 468 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 ATP8B4Q8TF62 1192 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 BEGAINQ9BUH8 593 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 DHX33Q9H6R0 707 aaKnown RBP9.93□□□□□ -0.82
HPS4-204ENST00000422379 EXOC1Q9NV70 894 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 NRBP1Q9UHY1 535 aa9.93□□□□□ -0.82
HPS4-204ENST00000422379 MYH9P35579 1960 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 F2P00734 622 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 GNRH1P01148 92 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 KRT18P05783 430 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 TPM3P06753 285 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 MYBP10242 640 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 HOXD10P28358 340 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 NMT1P30419 496 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 STX17P56962 302 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 FSCN1Q16658 493 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 FAM160B1Q5W0V3 765 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 KLHL10Q6JEL2 608 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 KSR1Q8IVT5 923 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 PXYLP1Q8TE99 480 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 SCFD1Q8WVM8 642 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 TMEM143Q96AN5 459 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 KIFC3Q9BVG8 833 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 ZHX3Q9H4I2 956 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 SMARCAD1Q9H4L7 1026 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 AZI2Q9H6S1 392 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 ADGRA3Q8IWK6 1321 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 TRIM49BA6NDI0 452 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 H3BRB1 525 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 GJB1P08034 283 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 HSPA8P11142 646 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 INSRRP14616 1297 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 GRK4P32298 578 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 GJA9P57773 515 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 MYL5Q02045 173 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 EMC2Q15006 297 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 DGKDQ16760 1214 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 ZC2HC1CQ53FD0 456 aaPredicted RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 FAM26FQ5R3K3 315 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 MARCH8Q5T0T0 291 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 LHX8Q68G74 356 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 CCSAPQ6IQ19 270 aaPredicted RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 EPM2AIP1Q7L775 607 aaPredicted RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 CCDC186Q7Z3E2 898 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 MLKLQ8NB16 471 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 UPF3AQ9H1J1 476 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 SEMA6BQ9H3T3 888 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 TUT1Q9H6E5 874 aaKnown RBP9.92□□□□□ -0.82
HPS4-204ENST00000422379 RMND1Q9NWS8 449 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 ERAP1Q9NZ08 941 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 PTPN22Q9Y2R2 807 aa9.92□□□□□ -0.82
HPS4-204ENST00000422379 IGKV6-21A0A0C4DH24 114 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 CAPN15O75808 1086 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 C6orf222P0C671 652 aaPredicted RBP9.91□□□□□ -0.82
HPS4-204ENST00000422379 TPM4P67936 248 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 NKX3-2P78367 333 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 PURAQ00577 322 aaKnown RBP9.91□□□□□ -0.82
HPS4-204ENST00000422379 FAM102BQ5T8I3 360 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms