RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SH2D3AQ9BRG2 576 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 ZSWIM4Q9H7M6 989 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 SUGCTQ9HAC7 445 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 PADI3Q9ULW8 664 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 H3BQV1 296 aa29.58■■■□□ 2.33
CDK9-202ENST00000421939 OR52Z1P0C646 297 aa29.58■■■□□ 2.33
CDK9-202ENST00000421939 CRYBB1P53674 252 aaPredicted RBP29.58■■■□□ 2.33
CDK9-202ENST00000421939 MCTP1Q6DN14 999 aa29.58■■■□□ 2.33
CDK9-202ENST00000421939 NEK9Q8TD19 979 aa29.58■■■□□ 2.33
CDK9-202ENST00000421939 OSMRQ99650 979 aa29.58■■■□□ 2.33
CDK9-202ENST00000421939 EIF2AK1Q9BQI3 630 aaKnown RBP29.58■■■□□ 2.33
CDK9-202ENST00000421939 CDHR5Q9HBB8 845 aa29.58■■■□□ 2.33
CDK9-202ENST00000421939 LCHNA4D1U4 455 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 GPR32O75388 356 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 CTTNQ14247 550 aaKnown RBP29.57■■■□□ 2.32
CDK9-202ENST00000421939 NBR1Q14596 966 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 TMEM266Q2M3C6 531 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 ZNF710Q8N1W2 664 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 TMEM40Q8WWA1 233 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 FTHL17Q9BXU8 183 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 CYP26B1Q9NR63 512 aa29.57■■■□□ 2.32
CDK9-202ENST00000421939 IGKV6-21A0A0C4DH24 114 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 POTEMA6NI47 508 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 ARHGEF15O94989 841 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 YWHABP31946 246 aaKnown RBP29.56■■■□□ 2.32
CDK9-202ENST00000421939 TAP1Q03518 808 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 LINC01599Q8WXQ3 324 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 TOP1MTQ969P6 601 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 PRDM12Q9H4Q4 367 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 NOC2LQ9Y3T9 749 aaKnown RBP29.56■■■□□ 2.32
CDK9-202ENST00000421939 PPME1Q9Y570 386 aa29.56■■■□□ 2.32
CDK9-202ENST00000421939 RPS6KA5O75582 802 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 SLITRK3O94933 977 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 FOSL2P15408 326 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 TOB1P50616 345 aaPredicted RBP29.55■■■□□ 2.32
CDK9-202ENST00000421939 NPEPPSP55786 919 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 NLRP11P59045 1033 aaKnown RBP29.55■■■□□ 2.32
CDK9-202ENST00000421939 DRP2Q13474 957 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 TPH2Q8IWU9 490 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 CEP170P1Q96L14 293 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 HSD17B14Q9BPX1 270 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 JPH2Q9BR39 696 aaPredicted RBP29.55■■■□□ 2.32
CDK9-202ENST00000421939 ADAMTS10Q9H324 1103 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 ERVK-5Q9HDB9 667 aa29.55■■■□□ 2.32
CDK9-202ENST00000421939 MAFO75444 373 aaPredicted RBP29.54■■■□□ 2.32
CDK9-202ENST00000421939 UPP2O95045 317 aa29.54■■■□□ 2.32
CDK9-202ENST00000421939 HTRA4P83105 476 aaPredicted RBP29.54■■■□□ 2.32
CDK9-202ENST00000421939 NFX1Q12986 1120 aaKnown RBP29.54■■■□□ 2.32
CDK9-202ENST00000421939 ODR4Q5SWX8 454 aa29.54■■■□□ 2.32
CDK9-202ENST00000421939 OTUD6AQ7L8S5 288 aa29.54■■■□□ 2.32
CDK9-202ENST00000421939 INSL6Q9Y581 213 aa29.54■■■□□ 2.32
CDK9-202ENST00000421939 MYO9BQ13459 2157 aa29.54■■■□□ 2.32
CDK9-202ENST00000421939 ENPP3O14638 875 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 LYPLA2O95372 231 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 DNM2P50570 870 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 GPC3P51654 580 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 LARP1BQ659C4 914 aaKnown RBP29.53■■■□□ 2.32
CDK9-202ENST00000421939 SLC7A3Q8WY07 619 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 SCLT1Q96NL6 688 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 TMX1Q9H3N1 280 aa29.53■■■□□ 2.32
CDK9-202ENST00000421939 ARID2Q68CP9 1835 aa29.52■■■□□ 2.32
CDK9-202ENST00000421939 EYSQ5T1H1 3165 aa29.52■■■□□ 2.32
CDK9-202ENST00000421939 TECP42680 631 aa29.52■■■□□ 2.32
CDK9-202ENST00000421939 FAM43BQ6ZT52 329 aaPredicted RBP29.52■■■□□ 2.32
CDK9-202ENST00000421939 FAM228AQ86W67 206 aa29.52■■■□□ 2.32
CDK9-202ENST00000421939 ZNF579Q8NAF0 562 aaKnown RBP29.52■■■□□ 2.32
CDK9-202ENST00000421939 YME1L1Q96TA2 773 aa29.52■■■□□ 2.32
CDK9-202ENST00000421939 GAS2L1Q99501 681 aaPredicted RBP29.52■■■□□ 2.32
CDK9-202ENST00000421939 TSPYL2Q9H2G4 693 aaPredicted RBP29.52■■■□□ 2.32
CDK9-202ENST00000421939 PCDHB6Q9Y5E3 794 aa29.52■■■□□ 2.32
CDK9-202ENST00000421939 TRANK1O15050 2925 aa29.51■■■□□ 2.32
CDK9-202ENST00000421939 COL4A6Q14031 1691 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 GPR182O15218 404 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 RFC5P40937 340 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 POLGP54098 1239 aaPredicted RBP29.51■■■□□ 2.31
CDK9-202ENST00000421939 XKR9Q5GH70 373 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 EXOC8Q8IYI6 725 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 C4orf32Q8N8J7 132 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 ZNF668Q96K58 619 aaPredicted RBP29.51■■■□□ 2.31
CDK9-202ENST00000421939 DHX33Q9H6R0 707 aaKnown RBP29.51■■■□□ 2.31
CDK9-202ENST00000421939 CERS4Q9HA82 394 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 SUCLA2Q9P2R7 463 aaPredicted RBP29.51■■■□□ 2.31
CDK9-202ENST00000421939 ST3GAL5Q9UNP4 418 aa29.51■■■□□ 2.31
CDK9-202ENST00000421939 TTC3P53804 2025 aa29.5■■■□□ 2.31
CDK9-202ENST00000421939 ZBTB39O15060 712 aa29.5■■■□□ 2.31
CDK9-202ENST00000421939 EIF4BP23588 611 aaKnown RBP29.5■■■□□ 2.31
CDK9-202ENST00000421939 RILPL1Q5EBL4 403 aa29.5■■■□□ 2.31
CDK9-202ENST00000421939 RTN4RL1Q86UN2 441 aaPredicted RBP29.5■■■□□ 2.31
CDK9-202ENST00000421939 SP7Q8TDD2 431 aaPredicted RBP29.5■■■□□ 2.31
CDK9-202ENST00000421939 NLRP7Q8WX94 980 aa29.5■■■□□ 2.31
CDK9-202ENST00000421939 LINC01553A4QN01 128 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 DARSP14868 501 aaKnown RBP29.49■■■□□ 2.31
CDK9-202ENST00000421939 CDC42EP1Q00587 391 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 PTGDRQ13258 359 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 SPRED2Q7Z698 418 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 ERMNQ8TAM6 284 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 ARNTL2Q8WYA1 636 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 TUFT1Q9NNX1 390 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 ANKEF1Q9NU02 776 aa29.49■■■□□ 2.31
CDK9-202ENST00000421939 K7ELQ4 463 aaPredicted RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms