RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.4
BRAT1-202ENST00000421712 RFC5P40937 340 aa17.58■□□□□ 0.4
BRAT1-202ENST00000421712 CDK5RAP3Q96JB5 506 aa17.58■□□□□ 0.4
BRAT1-202ENST00000421712 CELF4Q9BZC1 486 aaKnown RBP17.58■□□□□ 0.4
BRAT1-202ENST00000421712 DDX19AQ9NUU7 478 aaKnown RBP17.58■□□□□ 0.4
BRAT1-202ENST00000421712 KIAA1024Q9UPX6 916 aa17.58■□□□□ 0.4
BRAT1-202ENST00000421712 PPME1Q9Y570 386 aa17.58■□□□□ 0.4
BRAT1-202ENST00000421712 A0A1W2PPC1 479 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 MAFO75444 373 aaPredicted RBP17.57■□□□□ 0.4
BRAT1-202ENST00000421712 MUTP22033 750 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 UBA7P41226 1012 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 MGAT3Q09327 533 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 MBTPS1Q14703 1052 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 GPNMBQ14956 572 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 PTPAQ15257 358 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 KIZQ2M2Z5 673 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 RASSF8Q8NHQ8 419 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 SEPT8Q92599 483 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 ZNF668Q96K58 619 aaPredicted RBP17.57■□□□□ 0.4
BRAT1-202ENST00000421712 AK8Q96MA6 479 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 CEP89Q96ST8 783 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 PLIN2Q99541 437 aa17.57■□□□□ 0.4
BRAT1-202ENST00000421712 SUCLA2Q9P2R7 463 aaPredicted RBP17.57■□□□□ 0.4
BRAT1-202ENST00000421712 ARHGEF35A5YM69 484 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 CXCL10P02778 98 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 LONP1P36776 959 aaKnown RBP17.56■□□□□ 0.4
BRAT1-202ENST00000421712 RARRES1P49788 294 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 NLRP11P59045 1033 aaKnown RBP17.56■□□□□ 0.4
BRAT1-202ENST00000421712 IKBKEQ14164 716 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 ECM1Q16610 540 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 HABP4Q5JVS0 413 aaKnown RBP17.56■□□□□ 0.4
BRAT1-202ENST00000421712 CNKSR3Q6P9H4 555 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 CABP7Q86V35 215 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 HERVK_113Q902F9 699 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 TMEM143Q96AN5 459 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 MTRQ99707 1265 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 DNM3Q9UQ16 869 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 TANC1Q9C0D5 1861 aa17.56■□□□□ 0.4
BRAT1-202ENST00000421712 KDM3AQ9Y4C1 1321 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 USO1O60763 962 aaKnown RBP17.55■□□□□ 0.4
BRAT1-202ENST00000421712 BRD1O95696 1058 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
BRAT1-202ENST00000421712 GRIN1Q05586 938 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 DRP2Q13474 957 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 EMC2Q15006 297 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 SLC39A14Q15043 492 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 FBXO47Q5MNV8 452 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 MAEAQ7L5Y9 396 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 RHPN2Q8IUC4 686 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 TET1Q8NFU7 2136 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 TCP11Q8WWU5 503 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 NLRP7Q8WX94 980 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 VWCEQ96DN2 955 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 CALML4Q96GE6 196 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 OSMRQ99650 979 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 IFIH1Q9BYX4 1025 aaKnown RBP17.55■□□□□ 0.4
BRAT1-202ENST00000421712 OSBPL7Q9BZF2 842 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 DHX33Q9H6R0 707 aaKnown RBP17.55■□□□□ 0.4
BRAT1-202ENST00000421712 CDHR5Q9HBB8 845 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 ATP6V0A4Q9HBG4 840 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
BRAT1-202ENST00000421712 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
BRAT1-202ENST00000421712 IGKV6-21A0A0C4DH24 114 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 SPTLC2O15270 562 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 GAS2O43903 313 aaKnown RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 DGAT1O75907 488 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 KCNJ6P48051 423 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 NASPP49321 788 aaPredicted RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 CRYBB1P53674 252 aaPredicted RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 CDC42EP1Q00587 391 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 PAK2Q13177 524 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 LPIN1Q14693 890 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 PLEKHG4Q58EX7 1191 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 SPECC1Q5M775 1068 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 TSHZ1Q6ZSZ6 1077 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 ZNF710Q8N1W2 664 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 LINC01465Q8N7H1 131 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 KRI1Q8N9T8 703 aaKnown RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 USP38Q8NB14 1042 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 PSPC1Q8WXF1 523 aaKnown RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 MMTAG2Q9BU76 263 aaKnown RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 NT5C3AQ9H0P0 336 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 BHMT2Q9H2M3 363 aa17.54■□□□□ 0.4
BRAT1-202ENST00000421712 CXXC1Q9P0U4 656 aaPredicted RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 SRPRBQ9Y5M8 271 aaKnown RBP17.54■□□□□ 0.4
BRAT1-202ENST00000421712 ABHD14A-ACY1A0A1B0GW23 586 aa17.53■□□□□ 0.4
BRAT1-202ENST00000421712 GPR32O75388 356 aa17.53■□□□□ 0.4
BRAT1-202ENST00000421712 RPS6KA5O75582 802 aa17.53■□□□□ 0.4
BRAT1-202ENST00000421712 BAIAP3O94812 1187 aa17.53■□□□□ 0.4
BRAT1-202ENST00000421712 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
BRAT1-202ENST00000421712 CD52P31358 61 aa17.53■□□□□ 0.4
BRAT1-202ENST00000421712 GPC3P51654 580 aa17.53■□□□□ 0.4
BRAT1-202ENST00000421712 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
BRAT1-202ENST00000421712 MKRN4PQ13434 485 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms