RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PADI6Q6TGC4 694 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 INTS8Q75QN2 995 aaKnown RBP15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GPC2Q8N158 579 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 BORCS6Q96GS4 357 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 CALR3Q96L12 384 aaKnown RBP15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 RMDN3Q96TC7 470 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 LACRTQ9GZZ8 138 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 COL20A1Q9P218 1284 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 A0A0G2JMZ2 1700 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 WDR90Q96KV7 1748 aa15.93■□□□□ 0.14
HLA-DPA1-242ENST00000419277 NFASCO94856 1347 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 A0A0U1RQJ8 604 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ZNF263O14978 683 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 NKRFO15226 690 aaKnown RBP eCLIP15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PMM2O15305 246 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 RARRES1P49788 294 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 MRPS9P82933 396 aaKnown RBP15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GABPB1Q06547 395 aaPredicted RBP15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 KLHL30Q0D2K2 578 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 KLHDC7AQ5VTJ3 777 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ATRIPQ8WXE1 791 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 WRNIP1Q96S55 665 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 TEX13BQ9BXU2 312 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 RAVER2Q9HCJ3 691 aaKnown RBP15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 AGPAT3Q9NRZ7 376 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 INTUQ9ULD6 942 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ZHX2Q9Y6X8 837 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ARID2Q68CP9 1835 aa15.92■□□□□ 0.14
HLA-DPA1-242ENST00000419277 H0YCG3 227 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 HIP1RO75146 1068 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PLS3P13797 630 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 FERP16591 822 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PON1P27169 355 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 UBXN2AP68543 259 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 SPP2Q13103 211 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 RAPGEF1Q13905 1077 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 COG2Q14746 738 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ARHGEF16Q5VV41 709 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 CC2D1AQ6P1N0 951 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ATP6V0A1Q93050 837 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 INPP4AQ96PE3 977 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PARD6BQ9BYG5 372 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 RNF146Q9NTX7 359 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 TMOD4Q9NZQ9 345 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GCNT4Q9P109 453 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 SNX12Q9UMY4 172 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 EXOC7Q9UPT5 735 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 HYOU1Q9Y4L1 999 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PAPPA2Q9BXP8 1791 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 YWHABP31946 246 aaKnown RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 DSG3P32926 999 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 RTP1P59025 263 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 MCCD1P59942 119 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 CYP27A1Q02318 531 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 MAPK7Q13164 816 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GPS2Q13227 327 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ITGB3BPQ13352 177 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GNPTABQ3T906 1256 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 TBC1D10BQ4KMP7 808 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 DCAF17Q5H9S7 520 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 SH3D19Q5HYK7 790 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 NBPF12Q5TAG4 269 aaPredicted RBP15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 TCERG1LQ5VWI1 586 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 OTUD6AQ7L8S5 288 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 SAMD7Q7Z3H4 446 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 USP37Q86T82 979 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 VSIG10LQ86VR7 867 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 REPS2Q8NFH8 660 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ACCSQ96QU6 501 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 UIMC1Q96RL1 719 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 NLRC4Q9NPP4 1024 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 HOXC10Q9NYD6 342 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GPRC5DQ9NZD1 345 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 SAMM50Q9Y512 469 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 GJA3Q9Y6H8 435 aa15.91■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PTPRFP10586 1907 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 MACROD2A1Z1Q3 448 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 CES2O00748 559 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ATP1A1P05023 1023 aaKnown RBP15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PLEKP08567 350 aaPredicted RBP15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 PNMA6AP0CW24 399 aaPredicted RBP15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 KRT13P13646 458 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 JAM2P57087 298 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 SYCP3Q8IZU3 236 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 BANK1Q8NDB2 785 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 KCNN1Q92952 543 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 KLRG1Q96E93 195 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 ACAD9Q9H845 621 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 TRIM10Q9UDY6 481 aa15.9■□□□□ 0.14
HLA-DPA1-242ENST00000419277 A0A0A6YYK5 440 aaPredicted RBP15.89■□□□□ 0.13
HLA-DPA1-242ENST00000419277 RCCD1A6NED2 376 aa15.89■□□□□ 0.13
HLA-DPA1-242ENST00000419277 K7ENM7 598 aa15.89■□□□□ 0.13
HLA-DPA1-242ENST00000419277 TLR2O60603 784 aa15.89■□□□□ 0.13
HLA-DPA1-242ENST00000419277 EGFRP00533 1210 aa15.89■□□□□ 0.13
HLA-DPA1-242ENST00000419277 NMT1P30419 496 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms