RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 GDF6Q6KF10 455 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 UNQ6494/PRO21346Q6UXR6 183 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 C20orf204Q6ZNR8 217 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 NPAS3Q8IXF0 933 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 UBALD2Q8IYN6 164 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 ZGPATQ8N5A5 531 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 SHCBP1Q8NEM2 672 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 NUDT8Q8WV74 236 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 RPGRIP1Q96KN7 1286 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 RAD9AQ99638 391 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 C17orf80Q9BSJ5 609 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 PHF7Q9BWX1 381 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 FTOQ9C0B1 505 aaKnown RBP eCLIP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 TRPV6Q9H1D0 765 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 SPC25Q9HBM1 224 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 BTBD7Q9P203 1132 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 NCDNQ9UBB6 729 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 CNPY2Q9Y2B0 182 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 DMDP11532 3685 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 CDK5RAP2Q96SN8 1893 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 DUSP11O75319 330 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 RGS9O75916 674 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 STK10O94804 968 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 EYA4O95677 639 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 HOXB7P09629 217 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 WDR5P61964 334 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 KRT76Q01546 638 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 ZNF252P-AS1Q0IIN9 211 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 APOBRQ0VD83 1088 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 HYAL1Q12794 435 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 SEPT6Q14141 434 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 IKBKEQ14164 716 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 NFKBIBQ15653 356 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 KRT24Q2M2I5 525 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 CCDC144BQ3MJ40 725 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 SOWAHCQ53LP3 525 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 LBX2Q6XYB7 198 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 SLCO4C1Q6ZQN7 724 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 C1orf229Q6ZS94 237 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 UBE3BQ7Z3V4 1068 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 TMCO2Q7Z6W1 182 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 PDZD3Q86UT5 571 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 SLITRK4Q8IW52 837 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 ABRAQ8N0Z2 381 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 DTWD2Q8NBA8 298 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 SMRP1Q8NCR6 262 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 LRRC3Q9BY71 257 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 SEZ6LQ9BYH1 1024 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 FAM184BQ9ULE4 1060 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 CYP8B1Q9UNU6 501 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 ATAD5Q96QE3 1844 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 DLG5Q8TDM6 1919 aa6.52□□□□□ -1.37
ECHDC1-206ENST00000417628 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 ZFYVE26Q68DK2 2539 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 VPS13AQ96RL7 3174 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 TMEM8BA6NDV4 472 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 TTC36A6NLP5 189 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 SRRM3A6NNA2 597 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 C1QTNF9BB2RNN3 333 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 H3BNC9 293 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 KRT38O76015 456 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 GJB5O95377 273 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 CSF1RP07333 972 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 C1QTNF9P0C862 333 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 EPXP11678 715 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 ZSCAN20P17040 1043 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 NDUFV1P49821 464 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 PTPN11Q06124 597 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 IFIT5Q13325 482 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 GPM6BQ13491 265 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 PICALMQ13492 652 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 ITGA7Q13683 1181 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 CWF19L1Q69YN2 538 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 GIMAP6Q6P9H5 292 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 FAM177A1Q8N128 213 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 GOLGA6L1Q8N7Z2 621 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 KREMEN2Q8NCW0 462 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 NKD1Q969G9 470 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 GAL3ST3Q96A11 431 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 ACDQ96AP0 544 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 MSLNLQ96KJ4 702 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 SAMD11Q96NU1 681 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 MOV10L1Q9BXT6 1211 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 MIR1-1HGQ9H1L0 117 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 INCENPQ9NQS7 918 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 SAMM50Q9Y512 469 aa6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 EP300Q09472 2414 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-206ENST00000417628 H3BRJ5 948 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 CILPO75339 1184 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 CABYRO75952 493 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 ALBP02768 609 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 ASNSP08243 561 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 AOC1P19801 751 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms