RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 CLK2P49760 499 aaKnown RBP14.67□□□□□ -0.06
LINC00339-202ENST00000416769 CLCN3P51790 818 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 ADCY7P51828 1080 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 ADCK5Q3MIX3 580 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 NAALADL2Q58DX5 795 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 SWSAP1Q6NVH7 229 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 SYCE2Q6PIF2 218 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 SGMS1Q86VZ5 419 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 THNSL1Q8IYQ7 743 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 ASIC4Q96FT7 647 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 MTA3Q9BTC8 594 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 RGS18Q9NS28 235 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 USP34Q70CQ2 3546 aa14.67□□□□□ -0.06
LINC00339-202ENST00000416769 IGLV3-22A0A075B6J6 115 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 DENND3A2RUS2 1198 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 SMCO2A6NFE2 343 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 GPR32O75388 356 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 CPA1P15085 419 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 HSPA4P34932 840 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 KCNC3Q14003 757 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 DSC3Q14574 896 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 RTN1Q16799 776 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 RNF20Q5VTR2 975 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 PDXDC2PQ6P474 469 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 PLA2G4DQ86XP0 818 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 TMTC2Q8N394 836 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 KCNB2Q92953 911 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
LINC00339-202ENST00000416769 S1PR5Q9H228 398 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 ZNF302Q9NR11 478 aa14.66□□□□□ -0.06
LINC00339-202ENST00000416769 ZFHX2Q9C0A1 2572 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-202ENST00000416769 HBP1O60381 514 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 WEE2P0C1S8 567 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 FGFR4P22455 802 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 EXOSC10Q01780 885 aaKnown RBP14.65□□□□□ -0.06
LINC00339-202ENST00000416769 TSGA10IPQ3SY00 556 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 KANK3Q6NY19 840 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 SLC24A5Q71RS6 500 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 BMP8AQ7Z5Y6 402 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 LRRC71Q8N4P6 559 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 RASGRP4Q8TDF6 673 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 CRYGNQ8WXF5 182 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 GJA10Q969M2 543 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 PPP2R3CQ969Q6 453 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 KCNH6Q9H252 994 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 UPF2Q9HAU5 1272 aaKnown RBP14.65□□□□□ -0.06
LINC00339-202ENST00000416769 PCDHB12Q9Y5F1 795 aa14.65□□□□□ -0.06
LINC00339-202ENST00000416769 CFAP54Q96N23 3096 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 EDIL3O43854 480 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
LINC00339-202ENST00000416769 ZNF76P36508 570 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 TECP42680 631 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 CLLU1OSQ5K130 101 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 ANKRD54Q6NXT1 300 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 NME8Q8N427 588 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 FBXL6Q8N531 539 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 METTL13Q8N6R0 699 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 TCF25Q9BQ70 676 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 BARHL2Q9NY43 387 aa14.64□□□□□ -0.07
LINC00339-202ENST00000416769 PTPRZ1P23471 2315 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-202ENST00000416769 PLXNA3P51805 1871 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 GOLGA8AA7E2F4 631 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 IPO5O00410 1097 aaKnown RBP14.63□□□□□ -0.07
LINC00339-202ENST00000416769 ZBTB43O43298 467 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 FAM189BP81408 668 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 UGCGQ16739 394 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 FAM160B1Q5W0V3 765 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 PPP1R18Q6NYC8 613 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 MIS18BP1Q6P0N0 1132 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 CKAP2LQ8IYA6 745 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 RNF169Q8NCN4 708 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 ADAMTS10Q9H324 1103 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 ATP6V0A4Q9HBG4 840 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 C1orf112Q9NSG2 853 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 TMEM161AQ9NX61 479 aa14.63□□□□□ -0.07
LINC00339-202ENST00000416769 COL1A2P08123 1366 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 NT5C1B-RDH14C9J2C7 533 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 ZNF862O60290 1169 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 FOSP01100 380 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 RPLP2P05387 115 aaKnown RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 ATF7P17544 494 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 ADD1P35611 737 aaKnown RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 CRYBB1P53674 252 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 UBE3AQ05086 875 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 SIGLEC14Q08ET2 396 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 AP3B2Q13367 1082 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 DRP2Q13474 957 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 PTPN21Q16825 1174 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 ZNF484Q5JVG2 852 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 KCNT2Q6UVM3 1135 aa14.62□□□□□ -0.07
LINC00339-202ENST00000416769 TMEM173Q86WV6 379 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 SUGP1Q8IWZ8 645 aaKnown RBP14.62□□□□□ -0.07
LINC00339-202ENST00000416769 LINC01465Q8N7H1 131 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms