RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CENPPQ6IPU0 288 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 FAM114A2Q9NRY5 505 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 SNX24Q9Y343 169 aa15.95■□□□□ 0.14
NCKIPSD-204ENST00000416649 COL1A1P02452 1464 aaPredicted RBP15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 TRAF5O00463 557 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 FGGP02679 453 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 CYP2D6P10635 497 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 EPS15P42566 896 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 PMS2P54278 862 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 ASIC2Q16515 512 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 PPP1R15BQ5SWA1 713 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 ANO7Q6IWH7 933 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 EIF1ADQ8N9N8 165 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 GDAP1Q8TB36 358 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 GLG1Q92896 1179 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 CEP72Q9P209 647 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 NR2E1Q9Y466 385 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 LIN7AO14910 233 aaPredicted RBP15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 GNAT2P19087 354 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 ROR2Q01974 943 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 SEPT2Q15019 361 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 LETM2Q2VYF4 491 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 MFN1Q8IWA4 741 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 ACTRT1Q8TDG2 376 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 PPP1R12CQ9BZL4 782 aa15.94■□□□□ 0.14
NCKIPSD-204ENST00000416649 MYH2Q9UKX2 1941 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 RBAK-RBAKDNI3L0D1 243 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 FGFR1OPO95684 399 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 COL5A3P25940 1745 aaPredicted RBP15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 ZNF131P52739 623 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 AMPD3Q01432 767 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 DIXDC1Q155Q3 683 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 GRIK5Q16478 980 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 SLC10A5Q5PT55 438 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 TMEM154Q6P9G4 183 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 B4GALNT2Q8NHY0 566 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 LBHD1Q9BQE6 289 aaPredicted RBP15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 DDX23Q9BUQ8 820 aaKnown RBP15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 TRIM4Q9C037 500 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 CCSER1Q9C0I3 900 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 KCNK9Q9NPC2 374 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 CCDC188H7C350 402 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 FGFR4P22455 802 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 CALML3P27482 149 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 SESN3P58005 492 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 MECOMQ03112 1051 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 ADCY1Q08828 1119 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 CCDC25Q86WR0 208 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 FITM2Q8N6M3 262 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 RNF25Q96BH1 459 aaPredicted RBP15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 RPS6KC1Q96S38 1066 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 SYT15Q9BQS2 421 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 DLGAP2Q9P1A6 1054 aa15.93■□□□□ 0.14
NCKIPSD-204ENST00000416649 RIMBP2O15034 1052 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 NOL4O94818 638 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 GBP1P32455 592 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 PFKFB3Q16875 520 aaPredicted RBP15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 RNF220Q5VTB9 566 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 KSR1Q8IVT5 923 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 EZH1Q92800 747 aaPredicted RBP15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 TBC1D7Q9P0N9 293 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 CHD4Q14839 1912 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 ONECUT3O60422 494 aaPredicted RBP15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 CALM1P0DP23 149 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 CALM2P0DP24 149 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 CALM3P0DP25 149 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 KRT13P13646 458 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 BNIP1Q12981 228 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 HEATR3Q7Z4Q2 680 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 SEMA4AQ9H3S1 761 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 PCNTO95613 3336 aa15.92■□□□□ 0.14
NCKIPSD-204ENST00000416649 PPFIA2O75334 1257 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 GOLGA8HP0CJ92 632 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 RFC5P40937 340 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 PTK2Q05397 1052 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 ZC3H12AQ5D1E8 599 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 FBXO25Q8TCJ0 367 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 EPAS1Q99814 870 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 TSG101Q99816 390 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 PABPC3Q9H361 631 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 ARHGEF3Q9NR81 526 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 FOXO6A8MYZ6 492 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 CCNT1O60563 726 aaKnown RBP15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 UFL1O94874 794 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 USP4Q13107 963 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 SLC5A9Q2M3M2 681 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 TBC1D25Q3MII6 688 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 NELFCDQ8IXH7 590 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 C7orf25Q9BPX7 421 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 SLITRK6Q9H5Y7 841 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 DAAM1Q9Y4D1 1078 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 DR1Q01658 176 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 ZNF211Q13398 564 aaPredicted RBP15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 SV2BQ7L1I2 683 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 TEX9Q8N6V9 391 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 BORCS6Q96GS4 357 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 RMDN2Q96LZ7 410 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms