RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 TACC3Q9Y6A5 838 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 ATP6V1G2O95670 118 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 FGRP09769 529 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 SLCO1A2P46721 670 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 FNTAP49354 379 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 IL9RQ01113 521 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 NPY5RQ15761 445 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 FYB2Q5VWT5 728 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 CAPRIN2Q6IMN6 1127 aaKnown RBP12.54□□□□□ -0.4
SCN4B-202ENST00000415030 COL23A1Q86Y22 540 aaPredicted RBP12.54□□□□□ -0.4
SCN4B-202ENST00000415030 SPDL1Q96EA4 605 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 ERP44Q9BS26 406 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 PABPC3Q9H361 631 aaKnown RBP12.54□□□□□ -0.4
SCN4B-202ENST00000415030 ECT2Q9H8V3 914 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 NAGPAQ9UK23 515 aa12.54□□□□□ -0.4
SCN4B-202ENST00000415030 A0A0A6YYK5 440 aaPredicted RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 F8VZ95 297 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 PPP1R12AO14974 1030 aaPredicted RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 EPHB6O15197 1021 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 RASSF9O75901 435 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 GGPS1O95749 300 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 GAP43P17677 238 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 STRN3Q13033 797 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 USP15Q9Y4E8 981 aaPredicted RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 ZNF804BA4D1E1 1349 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 PRDX5P30044 214 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 ARHGAP44Q17R89 818 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 LACTB2Q53H82 288 aaPredicted RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 CRELD2Q6UXH1 353 aaPredicted RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 BBOF1Q8ND07 529 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 MINPP1Q9UNW1 487 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 ECEL1O95672 775 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 TRMT1LQ7Z2T5 733 aaKnown RBP12.53□□□□□ -0.4
SCN4B-202ENST00000415030 FAM186BQ8IYM0 893 aa12.53□□□□□ -0.4
SCN4B-202ENST00000415030 THAP12O43422 761 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 EVI5O60447 810 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 USP37Q86T82 979 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 COA7Q96BR5 231 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 CARD9Q9H257 536 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 FRMPD2Q68DX3 1309 aaPredicted RBP12.52□□□□□ -0.4
SCN4B-202ENST00000415030 USP54Q70EL1 1684 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 SCP2P22307 547 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 GTF2IP78347 998 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.4
SCN4B-202ENST00000415030 XRCC4Q13426 336 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 MYCT1Q8N699 235 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 GRAMD1AQ96CP6 724 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.4
SCN4B-202ENST00000415030 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.41
SCN4B-202ENST00000415030 TDP2O95551 362 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 TNIP1Q15025 636 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 VPS72Q15906 364 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 TRIM59Q8IWR1 403 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 PRMT1Q99873 361 aaKnown RBP12.52□□□□□ -0.41
SCN4B-202ENST00000415030 TRIM51Q9BSJ1 452 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 ROPN1BQ9BZX4 212 aaPredicted RBP12.52□□□□□ -0.41
SCN4B-202ENST00000415030 ROPN1Q9HAT0 212 aaPredicted RBP12.52□□□□□ -0.41
SCN4B-202ENST00000415030 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.41
SCN4B-202ENST00000415030 EXOC3O60645 756 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 MXRA7P84157 204 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.41
SCN4B-202ENST00000415030 MDM1Q8TC05 714 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
SCN4B-202ENST00000415030 PDXKO00764 312 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 CDK8P49336 464 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 TRIM68Q6AZZ1 485 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 SCFD2Q8WU76 684 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 KIFAP3Q92845 792 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 PFASO15067 1338 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 LRRC55Q6ZSA7 311 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 LRRC34Q8IZ02 419 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 MORC4Q8TE76 937 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 STMN2Q93045 179 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 GJA10Q969M2 543 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 PGM2Q96G03 612 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 E9PMD0 336 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
SCN4B-202ENST00000415030 GALCP54803 685 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 ZBTB16Q05516 673 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 SH3GL3Q99963 347 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
SCN4B-202ENST00000415030 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms