RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 NOSTRINQ8IVI9 506 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 TOP1MTQ969P6 601 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 DYDC2Q96IM9 177 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 MTMR9Q96QG7 549 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 CEP89Q96ST8 783 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 MAP7D2Q96T17 732 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 RGL1Q9NZL6 768 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 WRAP73Q9P2S5 460 aaPredicted RBP21.14■□□□□ 0.97
TRIM56-202ENST00000412507 AKT3Q9Y243 479 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 NOC2LQ9Y3T9 749 aaKnown RBP21.14■□□□□ 0.97
TRIM56-202ENST00000412507 KIF3AQ9Y496 699 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 ENPP3O14638 875 aa21.13■□□□□ 0.97
TRIM56-202ENST00000412507 DKC1O60832 514 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRIM56-202ENST00000412507 GPR32O75388 356 aa21.13■□□□□ 0.97
TRIM56-202ENST00000412507 SPRED2Q7Z698 418 aa21.13■□□□□ 0.97
TRIM56-202ENST00000412507 TMEM40Q8WWA1 233 aa21.13■□□□□ 0.97
TRIM56-202ENST00000412507 GAS2L1Q99501 681 aaPredicted RBP21.13■□□□□ 0.97
TRIM56-202ENST00000412507 OSMRQ99650 979 aa21.13■□□□□ 0.97
TRIM56-202ENST00000412507 LXNQ9BS40 222 aa21.13■□□□□ 0.97
TRIM56-202ENST00000412507 PRRC2BQ5JSZ5 2229 aaKnown RBP21.12■□□□□ 0.97
TRIM56-202ENST00000412507 RPS6KA5O75582 802 aa21.12■□□□□ 0.97
TRIM56-202ENST00000412507 U2AF2P26368 475 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIM56-202ENST00000412507 CRYBB1P53674 252 aaPredicted RBP21.12■□□□□ 0.97
TRIM56-202ENST00000412507 NLRP11P59045 1033 aaKnown RBP21.12■□□□□ 0.97
TRIM56-202ENST00000412507 CYP4A11Q02928 519 aa21.12■□□□□ 0.97
TRIM56-202ENST00000412507 NFX1Q12986 1120 aaKnown RBP21.12■□□□□ 0.97
TRIM56-202ENST00000412507 CTTNQ14247 550 aaKnown RBP21.12■□□□□ 0.97
TRIM56-202ENST00000412507 TTC38Q5R3I4 469 aa21.12■□□□□ 0.97
TRIM56-202ENST00000412507 LINC01599Q8WXQ3 324 aa21.12■□□□□ 0.97
TRIM56-202ENST00000412507 SMC3Q9UQE7 1217 aa21.12■□□□□ 0.97
TRIM56-202ENST00000412507 INSL6Q9Y581 213 aa21.12■□□□□ 0.97
TRIM56-202ENST00000412507 NPEPPSP55786 919 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 HTRA4P83105 476 aaPredicted RBP21.11■□□□□ 0.97
TRIM56-202ENST00000412507 DRP2Q13474 957 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 NBR1Q14596 966 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 RTN4RL1Q86UN2 441 aaPredicted RBP21.11■□□□□ 0.97
TRIM56-202ENST00000412507 C4orf19Q8IY42 314 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 ARNTL2Q8WYA1 636 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 ZNF668Q96K58 619 aaPredicted RBP21.11■□□□□ 0.97
TRIM56-202ENST00000412507 EIF2AK1Q9BQI3 630 aaKnown RBP21.11■□□□□ 0.97
TRIM56-202ENST00000412507 FTHL17Q9BXU8 183 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 CYP26B1Q9NR63 512 aa21.11■□□□□ 0.97
TRIM56-202ENST00000412507 NOL7Q9UMY1 257 aaKnown RBP21.11■□□□□ 0.97
TRIM56-202ENST00000412507 IGKV6-21A0A0C4DH24 114 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 LINC01553A4QN01 128 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 POTEMA6NI47 508 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 RFXAPO00287 272 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 SLITRK3O94933 977 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ORC2Q13416 577 aaPredicted RBP21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ADGRE1Q14246 886 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 MCTP1Q6DN14 999 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 TPH2Q8IWU9 490 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ZNF579Q8NAF0 562 aaKnown RBP21.1■□□□□ 0.97
TRIM56-202ENST00000412507 MAFAQ8NHW3 353 aaPredicted RBP21.1■□□□□ 0.97
TRIM56-202ENST00000412507 CEP170P1Q96L14 293 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ADAMTS10Q9H324 1103 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 TMX1Q9H3N1 280 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ZSWIM4Q9H7M6 989 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ERVK-5Q9HDB9 667 aa21.1■□□□□ 0.97
TRIM56-202ENST00000412507 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.1■□□□□ 0.97
TRIM56-202ENST00000412507 EYSQ5T1H1 3165 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 EPOPA6NHQ4 379 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 ZBTB39O15060 712 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 MAFO75444 373 aaPredicted RBP21.09■□□□□ 0.97
TRIM56-202ENST00000412507 YWHABP31946 246 aaKnown RBP21.09■□□□□ 0.97
TRIM56-202ENST00000412507 TRAPPC10P48553 1259 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 GPC3P51654 580 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 FAM228AQ86W67 206 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 YME1L1Q96TA2 773 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 ST3GAL5Q9UNP4 418 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 COL4A6Q14031 1691 aa21.09■□□□□ 0.97
TRIM56-202ENST00000412507 ATG2AQ2TAZ0 1938 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 H3BQV1 296 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 MGEA5O60502 916 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 OR52Z1P0C646 297 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 IGFBP4P22692 258 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 DNM2P50570 870 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 TOB1P50616 345 aaPredicted RBP21.08■□□□□ 0.97
TRIM56-202ENST00000412507 ODR4Q5SWX8 454 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 SP7Q8TDD2 431 aaPredicted RBP21.08■□□□□ 0.97
TRIM56-202ENST00000412507 HSD17B14Q9BPX1 270 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 TSPYL2Q9H2G4 693 aaPredicted RBP21.08■□□□□ 0.97
TRIM56-202ENST00000412507 MTUS1Q9ULD2 1270 aa21.08■□□□□ 0.97
TRIM56-202ENST00000412507 GPR182O15218 404 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 TECP42680 631 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 CUL4AQ13619 759 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 XKR9Q5GH70 373 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 OTUD6AQ7L8S5 288 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 ZNF710Q8N1W2 664 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 NEK9Q8TD19 979 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 NLRP7Q8WX94 980 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 SCLT1Q96NL6 688 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 TGS1Q96RS0 853 aaKnown RBP21.07■□□□□ 0.96
TRIM56-202ENST00000412507 JPH2Q9BR39 696 aaPredicted RBP21.07■□□□□ 0.96
TRIM56-202ENST00000412507 BMP2KQ9NSY1 1161 aaPredicted RBP21.07■□□□□ 0.96
TRIM56-202ENST00000412507 SUCLA2Q9P2R7 463 aaPredicted RBP21.07■□□□□ 0.96
TRIM56-202ENST00000412507 PCDHB6Q9Y5E3 794 aa21.07■□□□□ 0.96
TRIM56-202ENST00000412507 REV3LO60673 3130 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 IBSPP21815 317 aaPredicted RBP21.06■□□□□ 0.96
TRIM56-202ENST00000412507 EIF4BP23588 611 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms