RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 COG5Q9UP83 839 aa13.07□□□□□ -0.32
LINC00963-201ENST00000412141 CEP131Q9UPN4 1083 aa13.07□□□□□ -0.32
LINC00963-201ENST00000412141 SQORQ9Y6N5 450 aa13.07□□□□□ -0.32
LINC00963-201ENST00000412141 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
LINC00963-201ENST00000412141 H3BNC9 293 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 GRM6O15303 877 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 MAGEB2O15479 319 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 JAK2O60674 1132 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 CSDE1O75534 798 aaKnown RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 DGKIO75912 1065 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 STAG3L1P0CL83 205 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 FDPSP14324 419 aaKnown RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 FGFR4P22455 802 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 KCNA5P22460 613 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 TMOD1P28289 359 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 SFNP31947 248 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 CRYBB1P53674 252 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 TBC1D8BQ0IIM8 1120 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 NR5A1Q13285 461 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 PTPROQ16827 1216 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 EARS2Q5JPH6 523 aaKnown RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 FAM228AQ86W67 206 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 ETNPPLQ8TBG4 499 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 ALG13Q9NP73 1137 aaKnown RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 MRPL42Q9Y6G3 142 aaKnown RBP13.06□□□□□ -0.32
LINC00963-201ENST00000412141 TTC3P53804 2025 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 KDM3AQ9Y4C1 1321 aa13.06□□□□□ -0.32
LINC00963-201ENST00000412141 LOXHD1Q8IVV2 1947 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 EML1O00423 815 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 GPR182O15218 404 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 GPR32O75388 356 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 DRP2Q13474 957 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 TCEAL5Q5H9L2 206 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
LINC00963-201ENST00000412141 PLA2G4FQ68DD2 849 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 WASF1Q92558 559 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 GTF3C6Q969F1 213 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 ZNF689Q96CS4 500 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-201ENST00000412141 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
LINC00963-201ENST00000412141 UBE2ZQ9H832 354 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-201ENST00000412141 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 H3BQ06 376 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-201ENST00000412141 KRT2P35908 639 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
LINC00963-201ENST00000412141 GUCY1B3Q02153 619 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 XKR3Q5GH77 459 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 POTEDQ86YR6 584 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 NSUN7Q8NE18 718 aaKnown RBP13.04□□□□□ -0.32
LINC00963-201ENST00000412141 NLRP7Q8WX94 980 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-201ENST00000412141 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 RC3H2Q9HBD1 1191 aaKnown RBP13.04□□□□□ -0.32
LINC00963-201ENST00000412141 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-201ENST00000412141 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
LINC00963-201ENST00000412141 LINC00271P0C7V0 271 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 FGFR1P11362 822 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 COL9A1P20849 921 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 NPEPPSP55786 919 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 ODR4Q5SWX8 454 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 NCAPH2Q6IBW4 605 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 SLC24A5Q71RS6 500 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
LINC00963-201ENST00000412141 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
LINC00963-201ENST00000412141 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 RGS18Q9NS28 235 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 RGL1Q9NZL6 768 aa13.03□□□□□ -0.32
LINC00963-201ENST00000412141 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 C9IYK1 514 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 STBD1O95210 358 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 RB1P06400 928 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 GPC3P51654 580 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 PSMC5P62195 406 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 TRIM29Q14134 588 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 CLUL1Q15846 466 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 TIGD5Q53EQ6 642 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 ANO5Q75V66 913 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms