RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 MTMR8Q96EF0 704 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM169Q96HH4 297 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CASD1Q96PB1 797 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PIGSQ96S52 555 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 UBAC1Q9BSL1 405 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 RTKNQ9BST9 563 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPL9Q9BYD2 267 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 KRT23Q9C075 422 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMX1Q9H3N1 280 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CWH43Q9H720 699 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TBC1D17Q9HA65 648 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 KCNK12Q9HB15 430 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZSWIM5Q9P217 1185 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 NCDNQ9UBB6 729 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 HCSTQ9UBK5 93 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZBTB47Q9UFB7 747 aaPredicted RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ST3GAL5Q9UNP4 418 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SIT1Q9Y3P8 196 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 NOC2LQ9Y3T9 749 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 IRAK3Q9Y616 596 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 IGF2RP11717 2491 aa2.71□□□□□ -1.97
RNU4-53P-201ENST00000410828 KMT2BQ9UMN6 2715 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 NEDD4P46934 1319 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 FRMPD4Q14CM0 1322 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PLXNA3P51805 1871 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 A0A0D9SFI3 127 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DCDC2BA2VCK2 349 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 KRBA1A5PL33 1030 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PALM3A6NDB9 673 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 B4E1Z4 1266 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PIK3CDO00329 1044 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 LAMTOR5O43504 91 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 NARSO43776 548 aaKnown RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 HBP1O60381 514 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ATP9AO75110 1047 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DCNP07585 359 aaKnown RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ARP10275 920 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 CTSAP10619 480 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SRFP11831 508 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 KCNA2P16389 499 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 EPCAMP16422 314 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ITGB5P18084 799 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 KLRC1P26715 233 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 GBP2P32456 591 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PBX3P40426 434 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC26A2P50443 739 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 METAP2P50579 478 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 CRYBB1P53674 252 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 POLGP54098 1239 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 HNRNPUQ00839 825 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DMWDQ09019 674 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 MTMR1Q13613 665 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ACAP1Q15027 740 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PTPN14Q15678 1187 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF528Q3MIS6 628 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 KANK3Q6NY19 840 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ELMSAN1Q6PJG2 1045 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DCLRE1AQ6PJP8 1040 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 USP17L6PQ6QN14 398 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 MTHFD1LQ6UB35 978 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 C15orf39Q6ZRI6 1047 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 LRRC55Q6ZSA7 311 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PLPPR4Q7Z2D5 763 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DDX53Q86TM3 631 aaKnown RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF589Q86UQ0 364 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM228AQ86W67 206 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 KIAA0319LQ8IZA0 1049 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC39A11Q8N1S5 342 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF710Q8N1W2 664 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC44A3Q8N4M1 653 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 OTUD7AQ8TE49 926 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC22A17Q8WUG5 538 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 TRAPPC12Q8WVT3 735 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMEM40Q8WWA1 233 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ATRIPQ8WXE1 791 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 RSAD2Q8WXG1 361 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SHDQ96IW2 340 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM227BQ96M60 508 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PCYT2Q99447 389 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SDF4Q9BRK5 362 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 EMILIN2Q9BXX0 1053 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 BCO2Q9BYV7 579 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 RIOX1Q9H6W3 641 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 CNNM2Q9H8M5 875 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SFXN1Q9H9B4 322 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 CDHR5Q9HBB8 845 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 JPH1Q9HDC5 661 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 JADE2Q9NQC1 790 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 ARHGEF3Q9NR81 526 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPATA6Q9NWH7 488 aaPredicted RBP2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PKD2L1Q9P0L9 805 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DLGAP2Q9P1A6 1054 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC9A2Q9UBY0 812 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 STK39Q9UEW8 545 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DPP7Q9UHL4 492 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAD2L2Q9UI95 211 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 GMEB2Q9UKD1 530 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 FBXO4Q9UKT5 387 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 CA14Q9ULX7 337 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms