RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 NLRP4Q96MN2 994 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
PXMP4-203ENST00000409299 CLIC2O15247 247 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 GNAT1P11488 350 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 SNX1Q13596 522 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TRIM15Q9C019 465 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 SUDS3Q9H7L9 328 aaPredicted RBP13.09□□□□□ -0.31
PXMP4-203ENST00000409299 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 JAK3P52333 1124 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TAF11Q15544 211 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 RAET1EQ8TD07 263 aa13.09□□□□□ -0.31
PXMP4-203ENST00000409299 TJP3O95049 919 aa13.08□□□□□ -0.31
PXMP4-203ENST00000409299 RCN2Q14257 317 aa13.08□□□□□ -0.31
PXMP4-203ENST00000409299 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.31
PXMP4-203ENST00000409299 FAM84BQ96KN1 310 aaPredicted RBP13.08□□□□□ -0.31
PXMP4-203ENST00000409299 TMEM60Q9H2L4 133 aa13.08□□□□□ -0.31
PXMP4-203ENST00000409299 RNF146Q9NTX7 359 aa13.08□□□□□ -0.31
PXMP4-203ENST00000409299 TLK1Q9UKI8 766 aa13.08□□□□□ -0.31
PXMP4-203ENST00000409299 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.31
PXMP4-203ENST00000409299 A0A1W2PQC6 194 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 CXCR5P32302 372 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.32
PXMP4-203ENST00000409299 SLC38A10Q9HBR0 1119 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 LRRN2O75325 713 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 PLS3P13797 630 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 DDIT3P35638 169 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 CYP4F22Q6NT55 531 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 PDZD8Q8NEN9 1154 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 RAD54LQ92698 747 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 NOP53Q9NZM5 478 aaKnown RBP13.08□□□□□ -0.32
PXMP4-203ENST00000409299 PRPSAP2O60256 369 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 ZNF189O75820 626 aaPredicted RBP13.08□□□□□ -0.32
PXMP4-203ENST00000409299 GGPS1O95749 300 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 FCER1AP12319 257 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 MYO1EQ12965 1108 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
PXMP4-203ENST00000409299 FAM133BQ5BKY9 247 aaKnown RBP13.08□□□□□ -0.32
PXMP4-203ENST00000409299 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 MB21D2Q8IYB1 491 aaPredicted RBP13.08□□□□□ -0.32
PXMP4-203ENST00000409299 TMEM47Q9BQJ4 181 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 EDEM3Q9BZQ6 932 aa13.08□□□□□ -0.32
PXMP4-203ENST00000409299 ZKSCAN8Q15776 578 aaPredicted RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 ZBBXA8MT70 800 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 SLC16A10Q8TF71 515 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 ZBTB5O15062 677 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 MTMR1Q13613 665 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 THOC5Q13769 683 aaKnown RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 CATSPER4Q7RTX7 472 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 FAM8A1Q9UBU6 413 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 TYW5A2RUC4 315 aaKnown RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 FAM187AA6NFU0 413 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 PALMO75781 387 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 ELF1P32519 619 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 TAF1CQ15572 869 aaPredicted RBP13.07□□□□□ -0.32
PXMP4-203ENST00000409299 STRIP1Q5VSL9 837 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 DEPDC1BQ8WUY9 529 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 TTC1Q99614 292 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
PXMP4-203ENST00000409299 FGGP02679 453 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 ESRRAP11474 423 aaPredicted RBP13.06□□□□□ -0.32
PXMP4-203ENST00000409299 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
PXMP4-203ENST00000409299 C7orf31Q8N865 590 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
PXMP4-203ENST00000409299 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
PXMP4-203ENST00000409299 SLC26A4O43511 780 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 HMGCS2P54868 508 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 KLHL38Q2WGJ6 581 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 PYROXD1Q8WU10 500 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 CCDC124Q96CT7 223 aaKnown RBP13.06□□□□□ -0.32
PXMP4-203ENST00000409299 CEP95Q96GE4 821 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
PXMP4-203ENST00000409299 FOXP2O15409 715 aa13.06□□□□□ -0.32
PXMP4-203ENST00000409299 KRT37O76014 449 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms