RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 VGLL4Q14135 290 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 KNOP1Q1ED39 458 aaKnown RBP4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 C9orf131Q5VYM1 1079 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 WDR59Q6PJI9 974 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 KCTD17Q8N5Z5 321 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 RETREG2Q8NC44 543 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF397Q8NF99 534 aaPredicted RBP4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 SPIRE2Q8WWL2 714 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 CEP63Q96MT8 703 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 WDR24Q96S15 920 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 CRACR2AQ9BSW2 395 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 TTYH3Q9C0H2 523 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 PARVGQ9HBI0 331 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 HOXC10Q9NYD6 342 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF215Q9UL58 517 aaPredicted RBP4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 GPSM3Q9Y4H4 160 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 CSADQ9Y600 493 aa4.39□□□□□ -1.71
LRRTM4-201ENST00000409088 EPHB6O15197 1021 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 FANCGO15287 622 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 GAP43P17677 238 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 FECHP22830 423 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CASQ1P31415 396 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 HOXD13P35453 343 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 GHRHRQ02643 423 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TTLL12Q14166 644 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ARHGAP29Q52LW3 1261 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ZC2HC1CQ53FD0 456 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TJAP1Q5JTD0 557 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 FOXR2Q6PJQ5 311 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NIPA1Q7RTP0 329 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 KSR1Q8IVT5 923 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SAMD3Q8N6K7 520 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 REPS2Q8NFH8 660 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 DNAJC7Q99615 494 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TEX13BQ9BXU2 312 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 IKZF4Q9H2S9 585 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ZSWIM4Q9H7M6 989 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TBC1D22BQ9NU19 505 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SIK3Q9Y2K2 1263 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 V9GYY5 206 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ATAD5Q96QE3 1844 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 PDXKO00764 312 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CALUO43852 315 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SORBS3O60504 671 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NDUFA10O95299 355 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SLU7O95391 586 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 GNA14O95837 355 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ABL1P00519 1130 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 YBX3P16989 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 MUTP22033 750 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CCND2P30279 289 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 QARSP47897 775 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SP4Q02446 784 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 EDRF1Q3B7T1 1238 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 PROX2Q3B8N5 592 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ODR4Q5SWX8 454 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NOL9Q5SY16 702 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TREML2Q5T2D2 321 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 GADL1Q6ZQY3 521 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 MOB2Q70IA6 237 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 EPM2AIP1Q7L775 607 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CACNA2D4Q7Z3S7 1137 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NLRX1Q86UT6 975 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 VSIG10LQ86VR7 867 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 FAM178BQ8IXR5 827 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NEK11Q8NG66 645 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CCDC43Q96MW1 224 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ELP3Q9H9T3 547 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NLRC4Q9NPP4 1024 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ADAMTS5Q9UNA0 930 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TRAF3IP3Q9Y228 551 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SNCAIPQ9Y6H5 919 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 SSC5DA1L4H1 1573 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 PHLPP2Q6ZVD8 1323 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TMEM150BA6NC51 233 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CTIFO43310 598 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 KIF5CO60282 957 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 USO1O60763 962 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NR3C1P04150 777 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 CASP4P49662 377 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 OAZ1P54368 228 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 KCNC4Q03721 635 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 KCNMA1Q12791 1236 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 KCNH2Q12809 1159 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 FIGNQ5HY92 759 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF569Q5MCW4 686 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 UTP14CQ5TAP6 766 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TCERG1LQ5VWI1 586 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 RRAGAQ7L523 313 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 TRIM59Q8IWR1 403 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NEK9Q8TD19 979 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NSUN6Q8TEA1 469 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 KCTD12Q96CX2 325 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 PHOX2BQ99453 314 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ACAD9Q9H845 621 aa4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 NHEJ1Q9H9Q4 299 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 A1CFQ9NQ94 594 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 OLFML3Q9NRN5 406 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms