RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 LMCD1Q9NZU5 365 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 ARAP3Q8WWN8 1544 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 ZRANB2O95218 330 aaKnown RBP eCLIP19.84■□□□□ 0.77
USP25-204ENST00000400183 CYP2E1P05181 493 aaPredicted RBP19.84■□□□□ 0.77
USP25-204ENST00000400183 PPP1R18Q6NYC8 613 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 TPX2Q9ULW0 747 aaKnown RBP19.84■□□□□ 0.77
USP25-204ENST00000400183 ESRRAP11474 423 aaPredicted RBP19.84■□□□□ 0.77
USP25-204ENST00000400183 NFKBIAP25963 317 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 TTC13Q8NBP0 860 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 SERPINI1Q99574 410 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 LCMT1Q9UIC8 334 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 NCAPD2Q15021 1401 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 MYO3BQ8WXR4 1341 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 NCF2P19878 526 aaPredicted RBP19.84■□□□□ 0.77
USP25-204ENST00000400183 PPP6R3Q5H9R7 873 aaPredicted RBP19.84■□□□□ 0.77
USP25-204ENST00000400183 PADI6Q6TGC4 694 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 FAF2Q96CS3 445 aa19.84■□□□□ 0.77
USP25-204ENST00000400183 TNFAIP2Q03169 654 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 TAF1BQ53T94 588 aaPredicted RBP19.83■□□□□ 0.77
USP25-204ENST00000400183 FAM83BQ5T0W9 1011 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 PACSIN2Q9UNF0 486 aaPredicted RBP19.83■□□□□ 0.77
USP25-204ENST00000400183 NEDD4P46934 1319 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 IGKV5-2P06315 115 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 SETSIPP0DME0 302 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 CACNB3P54284 484 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 KRT76Q01546 638 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 CCDC138Q96M89 665 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 GCNAQ96QF7 691 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 GJB4Q9NTQ9 266 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 HOXC10Q9NYD6 342 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 GYS2P54840 703 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 ORC2Q13416 577 aaPredicted RBP19.83■□□□□ 0.77
USP25-204ENST00000400183 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.77
USP25-204ENST00000400183 DNAJC17Q9NVM6 304 aaKnown RBP19.83■□□□□ 0.77
USP25-204ENST00000400183 G3BP2Q9UN86 482 aaKnown RBP19.83■□□□□ 0.77
USP25-204ENST00000400183 MBD5Q9P267 1494 aa19.83■□□□□ 0.76
USP25-204ENST00000400183 PALMO75781 387 aa19.83■□□□□ 0.76
USP25-204ENST00000400183 ARL4CP56559 192 aa19.83■□□□□ 0.76
USP25-204ENST00000400183 CALR3Q96L12 384 aaKnown RBP19.83■□□□□ 0.76
USP25-204ENST00000400183 MRPL46Q9H2W6 279 aaKnown RBP19.83■□□□□ 0.76
USP25-204ENST00000400183 FEM1BQ9UK73 627 aa19.83■□□□□ 0.76
USP25-204ENST00000400183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.83■□□□□ 0.769e-7■■■□□ 17.5
USP25-204ENST00000400183 RWDD4Q6NW29 188 aaKnown RBP19.83■□□□□ 0.76
USP25-204ENST00000400183 RAD54LQ92698 747 aa19.83■□□□□ 0.76
USP25-204ENST00000400183 SPATS2LQ9NUQ6 558 aaKnown RBP19.83■□□□□ 0.76
USP25-204ENST00000400183 MINPP1Q9UNW1 487 aa19.83■□□□□ 0.76
USP25-204ENST00000400183 ZNF394Q53GI3 561 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 SEPT12Q8IYM1 358 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 MAML1Q92585 1016 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 GPC5P78333 572 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 SAYSD1Q9NPB0 183 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 ABHD10Q9NUJ1 306 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 OCRLQ01968 901 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 NUGGCQ68CJ6 796 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 NDUFAF2Q8N183 169 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 PAMP19021 973 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 ARID5BQ14865 1188 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 PODNQ7Z5L7 613 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 TRIM4Q9C037 500 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 NARFQ9UHQ1 456 aa19.82■□□□□ 0.76
USP25-204ENST00000400183 UTYO14607 1347 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 ANO9A1A5B4 782 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 CYP27B1O15528 508 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 C21orf2O43822 256 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 GCLMP48507 274 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 CD209Q9NNX6 404 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L15C9J2P7 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L13C9JLJ4 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L11C9JVI0 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L18D6R9N7 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L22D6RA61 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L17D6RBQ6 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L19D6RCP7 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L20D6RJB6 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 MAPK13O15264 365 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 CALB1P05937 261 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 PHKA2P46019 1235 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L24Q0WX57 530 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 PDCD2Q16342 344 aaPredicted RBP19.81■□□□□ 0.76
USP25-204ENST00000400183 RCSD1Q6JBY9 416 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 USP17L6PQ6QN14 398 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 FGFR1OP2Q9NVK5 253 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 STRIP2Q9ULQ0 834 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 TRIM49BA6NDI0 452 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 CFLARO15519 480 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 TAC1P20366 129 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 KRT39Q6A163 491 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 ENAHQ8N8S7 591 aaPredicted RBP19.81■□□□□ 0.76
USP25-204ENST00000400183 CXorf38Q8TB03 319 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 NSUN6Q8TEA1 469 aaKnown RBP19.81■□□□□ 0.76
USP25-204ENST00000400183 SNX24Q9Y343 169 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 APOEP02649 317 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 GNAT1P11488 350 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 ZNF699Q32M78 642 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.81■□□□□ 0.76
USP25-204ENST00000400183 CRLF3Q8IUI8 442 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 UPF3AQ9H1J1 476 aaKnown RBP19.81■□□□□ 0.76
USP25-204ENST00000400183 ASNSD1Q9NWL6 643 aa19.81■□□□□ 0.76
USP25-204ENST00000400183 E9PMD0 336 aa19.8■□□□□ 0.76
USP25-204ENST00000400183 SKIP12755 728 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms