RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 KIF2CQ99661 725 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.95□□□□□ -0.985e-13■□□□□ 8.3
SPTLC3-201ENST00000399002 ERBB3P21860 1342 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TMEM94Q12767 1356 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 HSPA4LO95757 839 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 ARHGDIAP52565 204 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PMS2P54278 862 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 SNRPFP62306 86 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TOB2Q14106 344 aaPredicted RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PROSER3Q2NL68 480 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 ITPRIPL1Q6GPH6 555 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 ELOA2Q8IYF1 753 aaPredicted RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 RNF139Q8WU17 664 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 OLFM3Q96PB7 478 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 DLC1Q96QB1 1528 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 STRBPQ96SI9 672 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 MTRQ99707 1265 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TPX2Q9ULW0 747 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 CLIC2O15247 247 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 SMARCA1P28370 1054 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 LTKP29376 864 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 IFNA8P32881 189 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PHKA2P46019 1235 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 NBPF20Q3BBV1 942 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 KRT80Q6KB66 452 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PDXDC1Q6P996 788 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 FRMD5Q7Z6J6 570 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TMEM35BQ8NCS4 154 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PCDHA6Q9UN73 950 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PCDHA8Q9Y5H6 950 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TMEM247A6NEH6 219 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PALMO75781 387 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 TMCC1O94876 653 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PNMA6AP0CW24 399 aaPredicted RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 SAT1P21673 171 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 SENP1Q9P0U3 644 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 DNAJC12Q9UKB3 198 aa8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 APOBEC2Q9Y235 224 aaKnown RBP8.95□□□□□ -0.98
SPTLC3-201ENST00000399002 PNPLA7Q6ZV29 1317 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 NR3C1P04150 777 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 MMEP08473 750 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 KRT7P08729 469 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 ADRA2BP18089 450 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 ZKSCAN8Q15776 578 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 GPIHBP1Q8IV16 184 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 PPWD1Q96BP3 646 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 VIPAS39Q9H9C1 493 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 IFNAR2P48551 515 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 GPC3P51654 580 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 PPP2R2AP63151 447 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 TFAMQ00059 246 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 FAM133BQ5BKY9 247 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 ZNF667Q5HYK9 610 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 RSRC2Q7L4I2 434 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 MASTLQ96GX5 879 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 SMYD2Q9NRG4 433 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 ORC4O43929 436 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 FGGP02679 453 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 CASP2P42575 452 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 EPM2AIP1Q7L775 607 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 MB21D2Q8IYB1 491 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 UIMC1Q96RL1 719 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 PCIF1Q9H4Z3 704 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 TUFT1Q9NNX1 390 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 LMTK2Q8IWU2 1503 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 LRRN2O75325 713 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 USP11P51784 963 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 COASYQ13057 564 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 CYP4F22Q6NT55 531 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 EFHBQ8N7U6 833 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 XXYLT1Q8NBI6 393 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 PITPNM3Q9BZ71 974 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 EML4Q9HC35 981 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 SUN2Q9UH99 717 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 FRMPD1Q5SYB0 1578 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 GOLGA8SH3BPF8 625 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 SMAPO00193 183 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 HMGB3O15347 200 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 PFDN1O60925 122 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 AP2B1P63010 937 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 EAPPQ56P03 285 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 MMS22LQ6ZRQ5 1243 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 UHMK1Q8TAS1 419 aaKnown RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 RASGRP4Q8TDF6 673 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 SKA2Q8WVK7 121 aaPredicted RBP8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 ZFP69BQ9UJL9 534 aa8.94□□□□□ -0.98
SPTLC3-201ENST00000399002 CHUKO15111 745 aa8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 ABL1P00519 1130 aa8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 GOLGA8FQ08AF8 430 aa8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 GOLGA8DPQ0D2H9 430 aa8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 NR5A1Q13285 461 aa8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 TRADDQ15628 312 aa8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 KNOP1Q1ED39 458 aaKnown RBP8.93□□□□□ -0.98
SPTLC3-201ENST00000399002 KIAA1755Q5JYT7 1200 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms