RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 AFPP02771 609 aaKnown RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 NR2F2P24468 414 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 MAP2K2P36507 400 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 EPS15P42566 896 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 NFIAQ12857 509 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 R3HDM1Q15032 1099 aaKnown RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 ARSHQ5FYA8 562 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 CCDC121Q6ZUS5 278 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 EPM2AIP1Q7L775 607 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 GPBP1Q86WP2 473 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SYCE1Q8N0S2 351 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 LARGE2Q8N3Y3 721 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 CCDC26Q8TAB7 109 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 MAGEC3Q8TD91 643 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 TATDN2Q93075 761 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 ZKSCAN4Q969J2 545 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 CENPTQ96BT3 561 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 MBOAT7Q96N66 472 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SPAG5Q96R06 1193 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 JMJD4Q9H9V9 463 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SLC40A1Q9NP59 571 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 KCNMB3Q9NPA1 279 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SIX2Q9NPC8 291 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 ZNF277Q9NRM2 450 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-207ENST00000396581 FAM114A2Q9NRY5 505 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 TBC1D7Q9P0N9 293 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 SERPINB13Q9UIV8 391 aa14.51□□□□□ -0.09
TRIM40-207ENST00000396581 MYO3BQ8WXR4 1341 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 F8VZ95 297 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 KRIT1O00522 736 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 PPFIA2O75334 1257 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 VIL1P09327 827 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 EIF3BP55884 814 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 EPHA7Q15375 998 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 QPCTQ16769 361 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 ANKRD20A8PQ5CZ79 823 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 WLSQ5T9L3 541 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 OLIG1Q8TAK6 271 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 RAPGEF5Q92565 580 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 CUL5Q93034 780 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 SEC16BQ96JE7 1060 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 AP1M1Q9BXS5 423 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 DDX47Q9H0S4 455 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 GOLPH3Q9H4A6 298 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 KIAA1024Q9UPX6 916 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 ARFGEF1Q9Y6D6 1849 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 MYH7BA7E2Y1 1941 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 CYP3A7-CYP3A51PA0A087WV96 503 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 GTPBP10A4D1E9 387 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 GHRP10912 638 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 CYP3A7P24462 503 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 UBE2SQ16763 222 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 EXOC3L4Q17RC7 722 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 KNOP1Q1ED39 458 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 BMT2Q1RMZ1 405 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 PREPLQ4J6C6 727 aaPredicted RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 DALRD3Q5D0E6 543 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 PEX26Q7Z412 305 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 GMLQ99445 158 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 CNOT10Q9H9A5 744 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 ARMCX3Q9UH62 379 aaPredicted RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 AMACRQ9UHK6 382 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 DIS3Q9Y2L1 958 aaKnown RBP14.5□□□□□ -0.09
TRIM40-207ENST00000396581 PCDHAC2Q9Y5I4 1007 aa14.5□□□□□ -0.09
TRIM40-207ENST00000396581 NPHP3-ACAD11A0A0J9YXS1 232 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 POTEB3A0JP26 581 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 POTECB2RU33 542 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 DNM1LO00429 736 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 PDXKO00764 312 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 DAPK3O43293 454 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 H2AFZP0C0S5 128 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 ITGA4P13612 1032 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 TMOD1P28289 359 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 HOXD13P35453 343 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 MRPL12P52815 198 aaKnown RBP14.49□□□□□ -0.09
TRIM40-207ENST00000396581 RSBN1LQ6PCB5 846 aaPredicted RBP14.49□□□□□ -0.09
TRIM40-207ENST00000396581 POTEBQ6S5H4 581 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 H2AFVQ71UI9 128 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 ATP8B4Q8TF62 1192 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 UBLCP1Q8WVY7 318 aaPredicted RBP14.49□□□□□ -0.09
TRIM40-207ENST00000396581 UPF1Q92900 1129 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM40-207ENST00000396581 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
TRIM40-207ENST00000396581 CXorf56Q9H5V9 222 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 NOVA2Q9UNW9 492 aaKnown RBP14.49□□□□□ -0.09
TRIM40-207ENST00000396581 CD2APQ9Y5K6 639 aa14.49□□□□□ -0.09
TRIM40-207ENST00000396581 LOC102724159A0A0B4J2E5 919 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 GOLGA6L7A0A1B0GV03 622 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRIM40-207ENST00000396581 SLC16A3O15427 465 aaKnown RBP14.48□□□□□ -0.09
TRIM40-207ENST00000396581 CASP5P51878 434 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 RBM5P52756 815 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRIM40-207ENST00000396581 XRCC4Q13426 336 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 PWP2Q15269 919 aaKnown RBP14.48□□□□□ -0.09
TRIM40-207ENST00000396581 ENOX2Q16206 610 aaKnown RBP14.48□□□□□ -0.09
TRIM40-207ENST00000396581 SPRED3Q2MJR0 410 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 FUKQ8N0W3 1084 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 SLC30A5Q8TAD4 765 aa14.48□□□□□ -0.09
TRIM40-207ENST00000396581 GJA10Q969M2 543 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms