RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 APBA1Q02410 837 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 C9orf131Q5VYM1 1079 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 GBP3Q9H0R5 595 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
ITGB1-202ENST00000396033 BACH1O14867 736 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 IREB2P48200 963 aaKnown RBP13.32□□□□□ -0.28
ITGB1-202ENST00000396033 KIF11P52732 1056 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 NFIL3Q16649 462 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 ZNF746Q6NUN9 644 aaPredicted RBP13.32□□□□□ -0.28
ITGB1-202ENST00000396033 FAM186BQ8IYM0 893 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 SYCP3Q8IZU3 236 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 NAPGQ99747 312 aaPredicted RBP13.32□□□□□ -0.28
ITGB1-202ENST00000396033 NUCKS1Q9H1E3 243 aaKnown RBP13.32□□□□□ -0.28
ITGB1-202ENST00000396033 MAFGO15525 162 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 KRT86O43790 486 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 ERCC6LQ2NKX8 1250 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 MOV10L1Q9BXT6 1211 aaKnown RBP13.31□□□□□ -0.28
ITGB1-202ENST00000396033 ELP3Q9H9T3 547 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 AKR1B10O60218 316 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 YBX3P16989 372 aaKnown RBP eCLIP13.31□□□□□ -0.287e-8■□□□□ 10.7
ITGB1-202ENST00000396033 PSMC2P35998 433 aaKnown RBP13.31□□□□□ -0.28
ITGB1-202ENST00000396033 CYP2J2P51589 502 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 TDRD12Q587J7 1177 aaKnown RBP13.31□□□□□ -0.28
ITGB1-202ENST00000396033 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 SFMBT2Q5VUG0 894 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 RDM1Q8NG50 284 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 SYT17Q9BSW7 474 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 PTPRFP10586 1907 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 KCNA2P16389 499 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 GOLGA5Q8TBA6 731 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 GANQ9H2C0 597 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 PCDHA10Q9Y5I2 948 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 PAPPA2Q9BXP8 1791 aa13.31□□□□□ -0.28
ITGB1-202ENST00000396033 TADA3O75528 432 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 PPP1R37O75864 691 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 RGS20O76081 388 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 PLS3P13797 630 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 VAV2P52735 878 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 RAPGEF1Q13905 1077 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 EXOC3L4Q17RC7 722 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 GNPTABQ3T906 1256 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 ZNF662Q6ZS27 426 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 CHST13Q8NET6 341 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 SLC35C1Q96A29 364 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 CDHR1Q96JP9 859 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 ZNF263O14978 683 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 SP4Q02446 784 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 UBXN4Q92575 508 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 IFIH1Q9BYX4 1025 aaKnown RBP13.3□□□□□ -0.28
ITGB1-202ENST00000396033 LACRTQ9GZZ8 138 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 LOC285556D6RIA3 1793 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 PEX10O60683 326 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 ACTN1P12814 892 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 NPEPPSP55786 919 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 ALCAMQ13740 583 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 SLC9C1Q4G0N8 1177 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 SYN2Q92777 582 aaPredicted RBP13.3□□□□□ -0.28
ITGB1-202ENST00000396033 SENP7Q9BQF6 1050 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 TIPINQ9BVW5 301 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 STRA6Q9BX79 667 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 TSGA10Q9BZW7 698 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 JPH1Q9HDC5 661 aaPredicted RBP13.3□□□□□ -0.28
ITGB1-202ENST00000396033 ANKEF1Q9NU02 776 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 GABBR1Q9UBS5 961 aa13.3□□□□□ -0.28
ITGB1-202ENST00000396033 KIAA1217Q5T5P2 1943 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 EFCAB8A8MWE9 144 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 STAM2O75886 525 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 MAPTP10636 758 aaKnown RBP13.29□□□□□ -0.28
ITGB1-202ENST00000396033 SLC9A1P19634 815 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 KIF5AQ12840 1032 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
ITGB1-202ENST00000396033 FAM102BQ5T8I3 360 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 LBX2Q6XYB7 198 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 MAF1Q9H063 256 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 TULP2O00295 520 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 SORBS3O60504 671 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 NF2P35240 595 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 HGSNATQ68CP4 663 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 PLCB1Q9NQ66 1216 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 GCNT4Q9P109 453 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 CDC23Q9UJX2 597 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 PCDHA13Q9Y5I0 950 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 SSU72P8A0A1W2PR75 194 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 IRF6O14896 467 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 SERPING1P05155 500 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms