RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PPM1EQ8WY54 764 aa34.5■■■■□ 3.11
CMTM4-202ENST00000394106 FTHL17Q9BXU8 183 aa34.5■■■■□ 3.11
CMTM4-202ENST00000394106 CHD7Q9P2D1 2997 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 RPS6KA5O75582 802 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 P4HBP07237 508 aaKnown RBP34.49■■■■□ 3.11
CMTM4-202ENST00000394106 MCM7P33993 719 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 SPIRE1Q08AE8 756 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 PLA2G4FQ68DD2 849 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 LINC01599Q8WXQ3 324 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 PCDHA12Q9UN75 941 aa34.49■■■■□ 3.11
CMTM4-202ENST00000394106 DKC1O60832 514 aaKnown RBP eCLIP34.48■■■■□ 3.11
CMTM4-202ENST00000394106 GPR32O75388 356 aa34.48■■■■□ 3.11
CMTM4-202ENST00000394106 TXKP42681 527 aa34.48■■■■□ 3.11
CMTM4-202ENST00000394106 NLRP11P59045 1033 aaKnown RBP34.48■■■■□ 3.11
CMTM4-202ENST00000394106 ANO5Q75V66 913 aa34.48■■■■□ 3.11
CMTM4-202ENST00000394106 TGS1Q96RS0 853 aaKnown RBP34.48■■■■□ 3.11
CMTM4-202ENST00000394106 ERVK-5Q9HDB9 667 aa34.48■■■■□ 3.11
CMTM4-202ENST00000394106 RGL1Q9NZL6 768 aa34.48■■■■□ 3.11
CMTM4-202ENST00000394106 RTN4RL1Q86UN2 441 aaPredicted RBP34.47■■■■□ 3.11
CMTM4-202ENST00000394106 DYDC2Q96IM9 177 aa34.47■■■■□ 3.11
CMTM4-202ENST00000394106 ZNF668Q96K58 619 aaPredicted RBP34.47■■■■□ 3.11
CMTM4-202ENST00000394106 LXNQ9BS40 222 aa34.47■■■■□ 3.11
CMTM4-202ENST00000394106 TMX1Q9H3N1 280 aa34.47■■■■□ 3.11
CMTM4-202ENST00000394106 TTC12Q9H892 705 aaPredicted RBP34.47■■■■□ 3.11
CMTM4-202ENST00000394106 WRAP73Q9P2S5 460 aaPredicted RBP34.47■■■■□ 3.11
CMTM4-202ENST00000394106 MCM2P49736 904 aa34.46■■■■□ 3.11
CMTM4-202ENST00000394106 CYP4A11Q02928 519 aa34.46■■■■□ 3.11
CMTM4-202ENST00000394106 SP7Q8TDD2 431 aaPredicted RBP34.46■■■■□ 3.11
CMTM4-202ENST00000394106 SCLT1Q96NL6 688 aa34.46■■■■□ 3.11
CMTM4-202ENST00000394106 CEP89Q96ST8 783 aa34.46■■■■□ 3.11
CMTM4-202ENST00000394106 ST3GAL5Q9UNP4 418 aa34.46■■■■□ 3.11
CMTM4-202ENST00000394106 KIF3AQ9Y496 699 aa34.46■■■■□ 3.11
CMTM4-202ENST00000394106 ERVK-21P61565 698 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 CTTNQ14247 550 aaKnown RBP34.45■■■■□ 3.11
CMTM4-202ENST00000394106 CCDC85BQ15834 202 aaPredicted RBP34.45■■■■□ 3.11
CMTM4-202ENST00000394106 ODR4Q5SWX8 454 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 NOSTRINQ8IVI9 506 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 MICALL1Q8N3F8 863 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 MTMR9Q96QG7 549 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 TSPYL2Q9H2G4 693 aaPredicted RBP34.45■■■■□ 3.11
CMTM4-202ENST00000394106 TMEM60Q9H2L4 133 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 ADAMTS10Q9H324 1103 aa34.45■■■■□ 3.11
CMTM4-202ENST00000394106 COL4A4P53420 1690 aaPredicted RBP34.44■■■■□ 3.1
CMTM4-202ENST00000394106 GPR182O15218 404 aa34.44■■■■□ 3.1
CMTM4-202ENST00000394106 IBSPP21815 317 aaPredicted RBP34.44■■■■□ 3.1
CMTM4-202ENST00000394106 NPEPPSP55786 919 aa34.44■■■■□ 3.1
CMTM4-202ENST00000394106 DRP2Q13474 957 aa34.44■■■■□ 3.1
CMTM4-202ENST00000394106 ZNF174Q15697 407 aa34.44■■■■□ 3.1
CMTM4-202ENST00000394106 FAM228AQ86W67 206 aa34.44■■■■□ 3.1
CMTM4-202ENST00000394106 CYP26B1Q9NR63 512 aa34.44■■■■□ 3.1
CMTM4-202ENST00000394106 TPH2Q8IWU9 490 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 C4orf19Q8IY42 314 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 CEP170P1Q96L14 293 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 EIF2AK1Q9BQI3 630 aaKnown RBP34.43■■■■□ 3.1
CMTM4-202ENST00000394106 C17orf80Q9BSJ5 609 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 BACH2Q9BYV9 841 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 ZSWIM4Q9H7M6 989 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 TTC3P53804 2025 aa34.43■■■■□ 3.1
CMTM4-202ENST00000394106 GTPBP6O43824 516 aaPredicted RBP34.42■■■■□ 3.1
CMTM4-202ENST00000394106 MAFO75444 373 aaPredicted RBP34.42■■■■□ 3.1
CMTM4-202ENST00000394106 DNM2P50570 870 aa34.42■■■■□ 3.1
CMTM4-202ENST00000394106 GPC3P51654 580 aa34.42■■■■□ 3.1
CMTM4-202ENST00000394106 GRB10Q13322 594 aa34.42■■■■□ 3.1
CMTM4-202ENST00000394106 ZNF710Q8N1W2 664 aa34.42■■■■□ 3.1
CMTM4-202ENST00000394106 GDPD5Q8WTR4 605 aa34.42■■■■□ 3.1
CMTM4-202ENST00000394106 NLRP7Q8WX94 980 aa34.42■■■■□ 3.1
CMTM4-202ENST00000394106 NOL7Q9UMY1 257 aaKnown RBP34.42■■■■□ 3.1
CMTM4-202ENST00000394106 IGKV6-21A0A0C4DH24 114 aa34.41■■■■□ 3.1
CMTM4-202ENST00000394106 DENND3A2RUS2 1198 aa34.41■■■■□ 3.1
CMTM4-202ENST00000394106 MGEA5O60502 916 aa34.41■■■■□ 3.1
CMTM4-202ENST00000394106 YWHABP31946 246 aaKnown RBP34.41■■■■□ 3.1
CMTM4-202ENST00000394106 TTC38Q5R3I4 469 aa34.41■■■■□ 3.1
CMTM4-202ENST00000394106 PHF6Q8IWS0 365 aaKnown RBP eCLIP34.41■■■■□ 3.1
CMTM4-202ENST00000394106 ZNF579Q8NAF0 562 aaKnown RBP34.41■■■■□ 3.1
CMTM4-202ENST00000394106 EYSQ5T1H1 3165 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 SLITRK3O94933 977 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 GJB2P29033 226 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 OTUD6AQ7L8S5 288 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 NPAS4Q8IUM7 802 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 ADAM2Q99965 735 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 JPH2Q9BR39 696 aaPredicted RBP34.4■■■■□ 3.1
CMTM4-202ENST00000394106 SUCLA2Q9P2R7 463 aaPredicted RBP34.4■■■■□ 3.1
CMTM4-202ENST00000394106 GTF3C3Q9Y5Q9 886 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 MTCH2Q9Y6C9 303 aa34.4■■■■□ 3.1
CMTM4-202ENST00000394106 COL4A6Q14031 1691 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 POTEMA6NI47 508 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 ZBTB39O15060 712 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 EIF4BP23588 611 aaKnown RBP34.39■■■■□ 3.1
CMTM4-202ENST00000394106 U2AF2P26368 475 aaKnown RBP eCLIP34.39■■■■□ 3.1
CMTM4-202ENST00000394106 FIBCD1Q8N539 461 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 FBXO22Q8NEZ5 403 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 SLC7A3Q8WY07 619 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 LRFN2Q9ULH4 789 aa34.39■■■■□ 3.1
CMTM4-202ENST00000394106 ADGRA3Q8IWK6 1321 aa34.38■■■■□ 3.09
CMTM4-202ENST00000394106 STAG3L1P0CL83 205 aa34.38■■■■□ 3.09
CMTM4-202ENST00000394106 POLGP54098 1239 aaPredicted RBP34.38■■■■□ 3.09
CMTM4-202ENST00000394106 ORC2Q13416 577 aaPredicted RBP34.38■■■■□ 3.09
CMTM4-202ENST00000394106 NBR1Q14596 966 aa34.38■■■■□ 3.09
CMTM4-202ENST00000394106 XKR9Q5GH70 373 aa34.38■■■■□ 3.09
CMTM4-202ENST00000394106 BMP2KQ9NSY1 1161 aaPredicted RBP34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms