RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 RAB15P59190 212 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MCCD1P59942 119 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KRTAP12-1P59990 96 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HILS1P60008 231 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KRTAP12-3P60328 96 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMA6P60900 246 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ERVK-21P61565 698 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TGFB2P61812 414 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LMO4P61968 165 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HERVK_113P62684 666 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP2CBP62714 309 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS26P62854 115 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GNB1P62873 340 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GNB2P62879 340 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RAC1P63000 192 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ERVK-24P63145 666 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP2CAP67775 309 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CSNK2BP67870 215 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 NOMO3P69849 1222 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP4F2P78329 520 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RBM6P78332 1123 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GTF2IP78347 998 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PIP4K2BP78356 416 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT83P78385 493 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 IRX3P78415 501 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 NKX6-1P78426 367 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ST5P78524 1137 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 IL13RA1P78552 427 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DLK1P80370 383 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL24P83731 157 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SMAD3P84022 425 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SRSF3P84103 164 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PRR5P85299 388 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ADORA2A-AS1P86434 159 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DAB2P98082 770 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 VLDLRP98155 873 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FGD1P98174 961 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF200P98182 395 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP2C1P98194 919 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FANCCQ00597 558 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PLCB2Q00722 1185 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PSG6Q00889 435 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 IRF9Q00978 393 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TIAL1Q01085 375 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SRSF2Q01130 221 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CD83Q01151 205 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 AMPD3Q01432 767 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PFKPQ01813 784 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 XPCQ01831 940 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EWSR1Q01844 656 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ROR2Q01974 943 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MEF2BQ02080 365 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH6A1Q02252 535 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DSG1Q02413 1049 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ID3Q02535 119 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FKBP4Q02790 459 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL6Q02878 288 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 POU3F1Q03052 451 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MLLT1Q03111 559 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 LMNB2Q03252 620 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PTH1RQ03431 593 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TLE1Q04724 770 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TLE4Q04727 773 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PLP2Q04941 152 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EGR4Q05215 589 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBTB16Q05516 673 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZP2Q05996 745 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DEUP1Q05D60 604 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP2R3AQ06190 1150 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 POU5F1BQ06416 359 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 FMR1Q06787 632 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EGR3Q06889 387 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CKAP4Q07065 602 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CD69Q07108 199 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SRSF4Q08170 494 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 PCDH1Q08174 1060 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 CACNB2Q08289 660 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EHHADHQ08426 723 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SPOCK1Q08629 439 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RBL2Q08999 1139 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SLFN5Q08AF3 891 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF844Q08AG5 666 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 DMWDQ09019 674 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EGFEM1PQ0D2K5 195 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 ARL16Q0P5N6 197 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 C19orf57Q0VDD7 668 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 Q0VFX4 171 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 HYAL1Q12794 435 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 KIF5AQ12840 1032 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GRSF1Q12849 480 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MYO1EQ12965 1108 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MTAPQ13126 283 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF2B5Q13144 721 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TARDBPQ13148 414 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 MAPK7Q13164 816 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 SRSF6Q13247 344 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM28Q13263 835 aaKnown RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 RIGQ13278 110 aa-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 NMIQ13287 307 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ54-201ENST00000390484 GRB10Q13322 594 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms