RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 EIF2AK2P19525 551 aaKnown RBP25.33■■□□□ 1.65
VPS16-201ENST00000380443 MAGEA1P43355 309 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 RNF10Q8N5U6 811 aaKnown RBP25.33■■□□□ 1.65
VPS16-201ENST00000380443 ZFP91Q96JP5 570 aaPredicted RBP25.33■■□□□ 1.65
VPS16-201ENST00000380443 SENP7Q9BQF6 1050 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 NLRC4Q9NPP4 1024 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 ANKEF1Q9NU02 776 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 TMOD4Q9NZQ9 345 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 TRIM10Q9UDY6 481 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 SAR1BQ9Y6B6 198 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 ZMYM2Q9UBW7 1377 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 ZBTB39O15060 712 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 DKC1O60832 514 aaKnown RBP eCLIP25.33■■□□□ 1.64
VPS16-201ENST00000380443 HIP1RO75146 1068 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 PPP1R37O75864 691 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 STAM2O75886 525 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 TOMM70O94826 608 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 ERCC3P19447 782 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 CYP27A1Q02318 531 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 PPP2R5AQ15172 486 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 C10orf76Q5T2E6 689 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 ZKSCAN4Q969J2 545 aaPredicted RBP25.33■■□□□ 1.64
VPS16-201ENST00000380443 ST6GALNAC4Q9H4F1 302 aa25.33■■□□□ 1.64
VPS16-201ENST00000380443 ADARB2Q9NS39 739 aaKnown RBP25.33■■□□□ 1.64
VPS16-201ENST00000380443 RCCD1A6NED2 376 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 DDX39AO00148 427 aaKnown RBP25.32■■□□□ 1.64
VPS16-201ENST00000380443 PSMC5P62195 406 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 CKAP4Q07065 602 aaKnown RBP25.32■■□□□ 1.64
VPS16-201ENST00000380443 MAPK7Q13164 816 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 BMS1Q14692 1282 aaKnown RBP25.32■■□□□ 1.64
VPS16-201ENST00000380443 KLHDC7AQ5VTJ3 777 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 TMCO3Q6UWJ1 677 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 NSMFQ6X4W1 530 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 VSIG10LQ86VR7 867 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 FMNL3Q8IVF7 1028 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 FAM186BQ8IYM0 893 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 SLC35C1Q96A29 364 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 IWS1Q96ST2 819 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 HOXC10Q9NYD6 342 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 FRMD4BQ9Y2L6 1034 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 JRKLQ9Y4A0 524 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 SAMM50Q9Y512 469 aa25.32■■□□□ 1.64
VPS16-201ENST00000380443 PHIPQ8WWQ0 1821 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 MYCLP12524 364 aaPredicted RBP25.31■■□□□ 1.64
VPS16-201ENST00000380443 RARRES1P49788 294 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 CLCN6P51797 869 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 DGKZQ13574 1117 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 ASIC2Q16515 512 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 GLIPR1L2Q4G1C9 344 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 TDRD12Q587J7 1177 aaKnown RBP25.31■■□□□ 1.64
VPS16-201ENST00000380443 ZNF746Q6NUN9 644 aaPredicted RBP25.31■■□□□ 1.64
VPS16-201ENST00000380443 CATSPERGQ6ZRH7 1159 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 RBM46Q8TBY0 533 aaKnown RBP25.31■■□□□ 1.64
VPS16-201ENST00000380443 CDHR1Q96JP9 859 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 ALS2CR12Q96Q35 445 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 CRACR2AQ9BSW2 395 aa25.31■■□□□ 1.64
VPS16-201ENST00000380443 PRLRP16471 622 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 BAATQ14032 418 aaPredicted RBP25.3■■□□□ 1.64
VPS16-201ENST00000380443 SH3D19Q5HYK7 790 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 DPY19L2P1Q6NXN4 242 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 USP50Q70EL3 339 aaPredicted RBP25.3■■□□□ 1.64
VPS16-201ENST00000380443 DRC1Q96MC2 740 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 AGPAT3Q9NRZ7 376 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 CLIC2O15247 247 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 PON1P27169 355 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 BRD3Q15059 726 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 C12orf56Q8IXR9 622 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 NSUN6Q8TEA1 469 aaKnown RBP25.3■■□□□ 1.64
VPS16-201ENST00000380443 CCDC43Q96MW1 224 aaKnown RBP25.3■■□□□ 1.64
VPS16-201ENST00000380443 TEX13BQ9BXU2 312 aa25.3■■□□□ 1.64
VPS16-201ENST00000380443 ATP8B3O60423 1300 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 TLR2O60603 784 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 PLS3P13797 630 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 UCHL3P15374 230 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 YWHABP31946 246 aaKnown RBP25.29■■□□□ 1.64
VPS16-201ENST00000380443 HMGCS2P54868 508 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 KCNA1Q09470 495 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 RAPGEF1Q13905 1077 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 ZC2HC1CQ53FD0 456 aaPredicted RBP25.29■■□□□ 1.64
VPS16-201ENST00000380443 EAPPQ56P03 285 aaPredicted RBP25.29■■□□□ 1.64
VPS16-201ENST00000380443 DCAF17Q5H9S7 520 aaPredicted RBP25.29■■□□□ 1.64
VPS16-201ENST00000380443 SNRNP48Q6IEG0 339 aaKnown RBP25.29■■□□□ 1.64
VPS16-201ENST00000380443 DAW1Q8N136 415 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 MSANTD4Q8NCY6 345 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 GGA3Q9NZ52 723 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 PKD2L1Q9P0L9 805 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 ZNF214Q9UL59 606 aaPredicted RBP25.29■■□□□ 1.64
VPS16-201ENST00000380443 RLFQ13129 1914 aa25.29■■□□□ 1.64
VPS16-201ENST00000380443 NR3C2P08235 984 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 CASP4P49662 377 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 KLHL30Q0D2K2 578 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 SLC18A3Q16572 532 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 TCERG1LQ5VWI1 586 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 INPP4AQ96PE3 977 aaPredicted RBP25.28■■□□□ 1.64
VPS16-201ENST00000380443 ACCSQ96QU6 501 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 SPAG5Q96R06 1193 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 FAM53CQ9NYF3 392 aa25.28■■□□□ 1.64
VPS16-201ENST00000380443 PUF60Q9UHX1 559 aaKnown RBP25.28■■□□□ 1.64
VPS16-201ENST00000380443 AFG3L2Q9Y4W6 797 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms