RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TUBA1BP68363 451 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 KRT71Q3SY84 523 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 METTL21CQ5VZV1 264 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 TUBA1AQ71U36 451 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 DDX18Q9NVP1 670 aaKnown RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CLIC5Q9NZA1 410 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 DACH1Q9UI36 760 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 SNX12Q9UMY4 172 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 GM2AP17900 193 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 BMP6P22004 513 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 FECHP22830 423 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 HSD17B3P37058 310 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CDK7P50613 346 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CYTH1Q15438 398 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 KCTD21Q4G0X4 260 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 SNX30Q5VWJ9 437 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 KAZNQ674X7 775 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 KLHL35Q6PF15 583 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 ENDOVQ8N8Q3 282 aaKnown RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF280CQ8ND82 737 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 FNDC8Q8TC99 324 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 PSTPIP2Q9H939 334 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 GDF3Q9NR23 364 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 HMG20BQ9P0W2 317 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 MAP3K2Q9Y2U5 619 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 LRP6O75581 1613 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 SPDYE16A6NNV3 312 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 YEATS4O95619 227 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CHN1P15882 459 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CXCR5P32302 372 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 HSPA9P38646 679 aaKnown RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CABP4P57796 275 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 RELAQ04206 551 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 EIF2B5Q13144 721 aaKnown RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 C3orf62Q6ZUJ4 267 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 DHX32Q7L7V1 743 aaKnown RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 PATL1Q86TB9 770 aaKnown RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 TTC8Q8TAM2 541 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 HEPHQ9BQS7 1158 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 C2orf49Q9BVC5 232 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 USP21Q9UK80 565 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 GPC6Q9Y625 555 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-204ENST00000380393 OVOS2A0A0G2JMS6 1433 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 MROH7-TTC4A0A0A0MT08 1334 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 MATN2O00339 956 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 FBXO21O94952 628 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 APOEP02649 317 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CDK4P11802 303 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 SERPINB8P50452 374 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 KIF23Q02241 960 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 RASSF7Q02833 373 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CNGA3Q16281 694 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 PROSER3Q2NL68 480 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 ST13P4Q8IZP2 240 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 DCLK2Q8N568 766 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 UBLCP1Q8WVY7 318 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 UTP4Q969X6 686 aaKnown RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 SKA1Q96BD8 255 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CCDC28BQ9BUN5 200 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 RBM12Q9NTZ6 932 aaKnown RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 C6orf203Q9P0P8 240 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 LMO7Q8WWI1 1683 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 FAM208AQ9UK61 1670 aaKnown RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 TBKBP1A7MCY6 615 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 SUN1O94901 812 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 EIF4A1P60842 406 aaKnown RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 HAND2P61296 217 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 ZCWPW2Q504Y3 356 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 APPBP2Q92624 585 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CENPTQ96BT3 561 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 LRRC27Q9C0I9 530 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 PARVBQ9HBI1 364 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 ZMAT5Q9UDW3 170 aaKnown RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CCPG1Q9ULG6 757 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 USP15Q9Y4E8 981 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 SIGLEC16A6NMB1 481 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 ENTPD5O75356 428 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CTDNEP1O95476 244 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 CYP2C9P11712 490 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 RASA1P20936 1047 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 IFNAR2P48551 515 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 KCNQ4P56696 695 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 HERVK_113P62684 666 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 GSTA3Q16772 222 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 SLC9C2Q5TAH2 1124 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 DEPDC1Q5TB30 811 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.08□□□□□ -0.86e-12■■■□□ 19.2
PTPRA-204ENST00000380393 CASKIN2Q8WXE0 1202 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 NSMCE3Q96MG7 304 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 RPAP3Q9H6T3 665 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-204ENST00000380393 HOXC10Q9NYD6 342 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
PTPRA-204ENST00000380393 NCAPD2Q15021 1401 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms