RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 GDAQ9Y2T3 454 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 COL11A2P13942 1736 aaPredicted RBP6.19□□□□□ -1.42
DDX58-201ENST00000379868 UTRNP46939 3433 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 BRCA1P38398 1863 aaKnown RBP6.19□□□□□ -1.42
DDX58-201ENST00000379868 RRN3P2A6NIE6 340 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 GNRH1P01148 92 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 LGALS2P05162 132 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 ASGR1P07306 291 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 CCL5P13501 91 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 TFAMQ00059 246 aaKnown RBP6.19□□□□□ -1.42
DDX58-201ENST00000379868 ARID5AQ03989 594 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 TYRO3Q06418 890 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 ORC2Q13416 577 aaPredicted RBP6.19□□□□□ -1.42
DDX58-201ENST00000379868 BFSP2Q13515 415 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 ZNF568Q3ZCX4 644 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 DUSP28Q4G0W2 176 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 SFR1Q86XK3 245 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 FAM133AQ8N9E0 248 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 CCDC94Q9BW85 323 aaPredicted RBP6.19□□□□□ -1.42
DDX58-201ENST00000379868 SPTLC3Q9NUV7 552 aa6.19□□□□□ -1.42
DDX58-201ENST00000379868 DDX20Q9UHI6 824 aaKnown RBP6.19□□□□□ -1.42
DDX58-201ENST00000379868 COL4A5P29400 1685 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 GOLGA8IPA6NC78 632 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 GOLGA8JA6NMD2 632 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CLDN3O15551 220 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CBFA2T2O43439 604 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 KPNA6O60684 536 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 PSEN2P49810 448 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 MRE11P49959 708 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 FUT2Q10981 343 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 PAK1Q13153 545 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 HSP90AA2PQ14568 343 aaPredicted RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 EMC2Q15006 297 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 MTFR1Q15390 333 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CELF3Q5SZQ8 465 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 FBXO46Q6PJ61 603 aaPredicted RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 UBE2Q2Q8WVN8 375 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 DNAJB3Q8WWF6 145 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 MMS19Q96T76 1030 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CUEDC2Q9H467 287 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 A0A1W2PQ27 194 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 A0A1W2PQ64 194 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 A0A1W2PQD8 194 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 HIP1RO75146 1068 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 DUSP11O75319 330 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 GHRP10912 638 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 SFPQP23246 707 aaKnown RBP eCLIP6.18□□□□□ -1.42
DDX58-201ENST00000379868 MSNP26038 577 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 HSD17B4P51659 736 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 GRIN1Q05586 938 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CACNB2Q08289 660 aaPredicted RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 PDIA5Q14554 519 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 KCNA10Q16322 511 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CATSPER3Q86XQ3 398 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 GPIHBP1Q8IV16 184 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 TRIB2Q92519 343 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 KIFAP3Q92845 792 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 OSMRQ99650 979 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 TUFT1Q9NNX1 390 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 GPRC5CQ9NQ84 441 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 ZMYND8Q9ULU4 1186 aaPredicted RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 FER1L6Q2WGJ9 1857 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 NPHP3-ACAD11A0A0J9YXS1 232 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 PIK3CDO00329 1044 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 BCRP11274 1271 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 GAP43P17677 238 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 RPA1P27694 616 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 CCND3P30281 292 aaPredicted RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 PRPHP41219 470 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 SSR1P43307 286 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 MRPS9P82933 396 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 TRIM32Q13049 653 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 PRPF4BQ13523 1007 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 GRIK4Q16099 956 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 PTGISQ16647 500 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 ZSCAN23Q3MJ62 389 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 WDR44Q5JSH3 913 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 REPS2Q8NFH8 660 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 U2AF1L4Q8WU68 220 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 PAWRQ96IZ0 340 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 GTPBP4Q9BZE4 634 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 DDX41Q9UJV9 622 aaKnown RBP6.18□□□□□ -1.42
DDX58-201ENST00000379868 ZNF536O15090 1300 aa6.18□□□□□ -1.42
DDX58-201ENST00000379868 FAM237AA0A1B0GTK4 181 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.17□□□□□ -1.42
DDX58-201ENST00000379868 EYA4O95677 639 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 ARPP19P56211 112 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 LRMPQ12912 555 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 ITGA7Q13683 1181 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 RAPGEF1Q13905 1077 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 GRB14Q14449 540 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 CCDC60Q8IWA6 550 aaPredicted RBP6.17□□□□□ -1.42
DDX58-201ENST00000379868 ZNF397Q8NF99 534 aaPredicted RBP6.17□□□□□ -1.42
DDX58-201ENST00000379868 NELFBQ8WX92 580 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 BBXQ8WY36 941 aaPredicted RBP6.17□□□□□ -1.42
DDX58-201ENST00000379868 RAD54LQ92698 747 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 INPP4AQ96PE3 977 aaPredicted RBP6.17□□□□□ -1.42
DDX58-201ENST00000379868 ACCSQ96QU6 501 aa6.17□□□□□ -1.42
DDX58-201ENST00000379868 MSTO1Q9BUK6 570 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms