RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CNOT10Q9H9A5 744 aaKnown RBP12.32□□□□□ -0.44
SMAD9-202ENST00000379826 SLC4A9Q96Q91 983 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-202ENST00000379826 SSU72P8A0A1W2PR75 194 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 SART1O43290 800 aaKnown RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 HARSP12081 509 aaKnown RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 PCK1P35558 622 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 KNOP1Q1ED39 458 aaKnown RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 VPS37BQ9H9H4 285 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 PNMA2Q9UL42 364 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 ICA1Q05084 483 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 BIRC3Q13489 604 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 SPOUT1Q5T280 376 aaKnown RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 IRF2BP1Q8IU81 584 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 PASKQ96RG2 1323 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 RASGRF2O14827 1237 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 KRT15P19012 456 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 ATP2B4P23634 1241 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 SEC16BQ96JE7 1060 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 IKBKGQ9Y6K9 419 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 PPEF1O14829 653 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 ZBTB5O15062 677 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 MYCLP12524 364 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 CHN1P15882 459 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 GBP1P32455 592 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 PEX19P40855 299 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 GPSM2P81274 684 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 KAZNQ674X7 775 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 FMNL3Q8IVF7 1028 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 HOMER3Q9NSC5 361 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
SMAD9-202ENST00000379826 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD9-202ENST00000379826 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 GRAPQ13588 217 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 SLC35G2Q8TBE7 412 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-202ENST00000379826 SLC40A1Q9NP59 571 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 GOLGA8IPA6NC78 632 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 GOLGA8JA6NMD2 632 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 CCDC188H7C350 402 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 SESN3P58005 492 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 SLC15A2Q16348 729 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 DPH6Q7L8W6 267 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 TNFRSF25Q93038 417 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 KLHL14Q9P2G3 628 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 CHUKO15111 745 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 UCHL3P15374 230 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 DRAP1Q14919 205 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-202ENST00000379826 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 RPUSD2Q8IZ73 545 aaKnown RBP12.3□□□□□ -0.44
SMAD9-202ENST00000379826 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 MICAL1Q8TDZ2 1067 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF653Q96CK0 615 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 LBHD1Q9BQE6 289 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-202ENST00000379826 TLR10Q9BXR5 811 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 MST1RQ04912 1400 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 CDK17Q00537 523 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 FUT2Q10981 343 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 TRADDQ15628 312 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 ISCUQ9H1K1 167 aa12.3□□□□□ -0.44
SMAD9-202ENST00000379826 DLATP10515 647 aaKnown RBP12.29□□□□□ -0.44
SMAD9-202ENST00000379826 ATF2P15336 505 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 MXRA7P84157 204 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 TMED2Q15363 201 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 CLUL1Q15846 466 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
SMAD9-202ENST00000379826 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 MIER3Q7Z3K6 550 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 MYCBPAPQ8TBZ2 947 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 FLT1P17948 1338 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 PDE6CP51160 858 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 CHMP6Q96FZ7 201 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 CYTH3O43739 400 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 ECEL1O95672 775 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
SMAD9-202ENST00000379826 SGO2Q562F6 1265 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 LINC00116Q8NCU8 138 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
SMAD9-202ENST00000379826 ARHGEF2Q92974 986 aaKnown RBP12.29□□□□□ -0.44
SMAD9-202ENST00000379826 CAVIN3Q969G5 261 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms