RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 IFNL3Q8IZI9 196 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 FBXO25Q8TCJ0 367 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 RFC1P35251 1148 aaPredicted RBP11.77□□□□□ -0.53
USP6NL-202ENST00000379237 MLH1P40692 756 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 TXKP42681 527 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 CDK17Q00537 523 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 BTKQ06187 659 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 SLC18A3Q16572 532 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 ERGIC2Q96RQ1 377 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 MYLK2Q9H1R3 596 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 SEMA4AQ9H3S1 761 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 CLIC5Q9NZA1 410 aa11.77□□□□□ -0.53
USP6NL-202ENST00000379237 TNKSO95271 1327 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 ZSCAN9O15535 394 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-202ENST00000379237 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-202ENST00000379237 WASHC2DQ5SRD0 308 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 IZUMO2Q6UXV1 221 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 PIGWQ7Z7B1 504 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 E2F6O75461 281 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 USP11P51784 963 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 MARCH10Q8NA82 808 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-202ENST00000379237 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 ERP44Q9BS26 406 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 NEUROG2Q9H2A3 272 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 PRDM11Q9NQV5 511 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 CEP72Q9P209 647 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 AMOTL2Q9Y2J4 779 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 TPBGLP0DKB5 382 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 ADCY8P40145 1251 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 GNAQP50148 359 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 SPARCL1Q14515 664 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 SESTD1Q86VW0 696 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 SPATA20Q8TB22 786 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 UBN1Q9NPG3 1134 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 BTBD7Q9P203 1132 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 IKBKGQ9Y6K9 419 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 COMMD3-BMI1R4GMX3 469 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 PITPNM2Q9BZ72 1349 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 CCNT1O60563 726 aaKnown RBP11.76□□□□□ -0.53
USP6NL-202ENST00000379237 CCDC22O60826 627 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 TJP3O95049 919 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 CALM1P0DP23 149 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 CALM2P0DP24 149 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 CALM3P0DP25 149 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 PLCG1P19174 1290 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 PGM1P36871 562 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 AP2B1P63010 937 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 ZBTB17Q13105 803 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 MYBPC3Q14896 1274 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 TRIP13Q15645 432 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-202ENST00000379237 RIBC1Q8N443 379 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-202ENST00000379237 VPS37BQ9H9H4 285 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 ARHGEF3Q9NR81 526 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 TMOD2Q9NZR1 351 aa11.76□□□□□ -0.53
USP6NL-202ENST00000379237 WDR19Q8NEZ3 1342 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 ABCA9Q8IUA7 1624 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 A0A087X0T9 212 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 FAM228BP0C875 321 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 STK4Q13043 487 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 SGSM1Q2NKQ1 1148 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 PGM2Q96G03 612 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 SPZ1Q9BXG8 430 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 LRRC27Q9C0I9 530 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-202ENST00000379237 UNC45AQ9H3U1 944 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 VAT1LQ9HCJ6 419 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 THEGQ9P2T0 379 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
USP6NL-202ENST00000379237 TECP42680 631 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 ATP2C1P98194 919 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-202ENST00000379237 DSG1Q02413 1049 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 SLC34A1Q06495 639 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 TNIP1Q15025 636 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 CNGA2Q16280 664 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 EAPPQ56P03 285 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-202ENST00000379237 KRT79Q5XKE5 535 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 PPP1R14CQ8TAE6 165 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 ZNF507Q8TCN5 953 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 LENG1Q96BZ8 264 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-202ENST00000379237 RILPQ96NA2 401 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 ZNF184Q99676 751 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-202ENST00000379237 SALL4Q9UJQ4 1053 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 PALLDQ8WX93 1383 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 NCAPD2Q15021 1401 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 ZWINTO95229 277 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 SUPT20HQ8NEM7 779 aa11.75□□□□□ -0.53
USP6NL-202ENST00000379237 DDX12PQ92771 950 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms