RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 SEC24CP53992 1094 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 USP46P62068 366 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 ARHGAP24Q8N264 748 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 DDHD1Q8NEL9 900 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 PCDHA12Q9UN75 941 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
NPHS1-202ENST00000378910 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
NPHS1-202ENST00000378910 PCP4L1A6NKN8 68 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 LRRC53A6NM62 1247 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 RFC5P40937 340 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 PTGISQ16647 500 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 NLRP9Q7RTR0 991 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ZFAND2BQ8WV99 257 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 PCDH18Q9HCL0 1135 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 PTPRMP28827 1452 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 F8W031 263 aaPredicted RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 EXOC3O60645 756 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 STAMBPO95630 424 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 FAM107AO95990 144 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 MDH1P40925 334 aaKnown RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ANTXR2P58335 489 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 GRIN1Q05586 938 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 SCARF1Q14162 830 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 BBOF1Q8ND07 529 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 CCDC188H7C350 402 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 AP3B1O00203 1094 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 THAP12O43422 761 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 BCRP11274 1271 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ENAHQ8N8S7 591 aaPredicted RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ANKRD27Q96NW4 1050 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 CCPG1Q9ULG6 757 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ALKQ9UM73 1620 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 CYP2D7A0A087X1C5 515 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 GFPT1Q06210 699 aaPredicted RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 KCNA1Q09470 495 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 YTHDF3Q7Z739 585 aaKnown RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 MKL1Q969V6 931 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 DACT3Q96B18 629 aaPredicted RBP12.68□□□□□ -0.38
NPHS1-202ENST00000378910 ANKRD2Q9GZV1 360 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
NPHS1-202ENST00000378910 BACH1O14867 736 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 MYBPC3Q14896 1274 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 RABL6Q3YEC7 729 aaPredicted RBP12.67□□□□□ -0.38
NPHS1-202ENST00000378910 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 CRELD2Q6UXH1 353 aaPredicted RBP12.67□□□□□ -0.38
NPHS1-202ENST00000378910 MAEAQ7L5Y9 396 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 PIAS4Q8N2W9 510 aaPredicted RBP12.67□□□□□ -0.38
NPHS1-202ENST00000378910 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 CAPN1P07384 714 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 NR2F2P24468 414 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 PTPAQ15257 358 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 C6orf183Q5T699 404 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 ALKBH5Q6P6C2 394 aaKnown RBP12.67□□□□□ -0.38
NPHS1-202ENST00000378910 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 RDH13Q8NBN7 331 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
NPHS1-202ENST00000378910 TFR2Q9UP52 801 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 CPDO75976 1380 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 FAM205CA6NFA0 338 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 RASGRF2O14827 1237 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 KRT5P13647 590 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 ARL1P40616 181 aaPredicted RBP12.67□□□□□ -0.38
NPHS1-202ENST00000378910 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 MYCT1Q8N699 235 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 CYFIP2Q96F07 1278 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 TRAPPC9Q96Q05 1148 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 CORO1BQ9BR76 489 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 ZMYND12Q9H0C1 365 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 EHD4Q9H223 541 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 AGPAT5Q9NUQ2 364 aa12.67□□□□□ -0.38
NPHS1-202ENST00000378910 PASKQ96RG2 1323 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 VDRP11473 427 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 DPYDQ12882 1025 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 NEK10Q6ZWH5 1172 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 CFAP57Q96MR6 1250 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 CCDC68Q9H2F9 335 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 B3GALNT1O75752 331 aa12.66□□□□□ -0.38
NPHS1-202ENST00000378910 EIF2B2P49770 351 aaKnown RBP12.66□□□□□ -0.38
NPHS1-202ENST00000378910 ERVK-24P63145 666 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms