RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 EXT2Q93063 718 aa11.99□□□□□ -0.49
RAD50-201ENST00000378823 PAGE5Q96GU1 130 aa11.99□□□□□ -0.49
RAD50-201ENST00000378823 ASPSCR1Q9BZE9 553 aa11.99□□□□□ -0.49
RAD50-201ENST00000378823 H0Y3Z8 333 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MTBPQ96DY7 904 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 PAWRQ96IZ0 340 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 DACH2Q96NX9 599 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 HPCAL4Q9UM19 191 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 SUGT1Q9Y2Z0 365 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 CCNE1P24864 410 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 HDAC4P56524 1084 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 UBXN2AP68543 259 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 CYP27A1Q02318 531 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 KLHL8Q9P2G9 620 aaPredicted RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 STRIP2Q9ULQ0 834 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 A0A087WWV3 80 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 DIAPH2O60879 1101 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 CHGBP05060 677 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 TTC13Q8NBP0 860 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MAGEB5Q9BZ81 275 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 APBA3O96018 575 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 PHKG2P15735 406 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 AARSP49588 968 aaKnown RBP eCLIP11.98□□□□□ -0.499e-8■■■■□ 21.8
RAD50-201ENST00000378823 OSTNP61366 133 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MAP3K10Q02779 954 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 ZBTB33Q86T24 672 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 ZSWIM5Q9P217 1185 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 ZNF212Q9UDV6 495 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 KIF23Q02241 960 aaPredicted RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 TTC8Q8TAM2 541 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 CNKSR1Q969H4 720 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 NAF1Q96HR8 494 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MYO18AQ92614 2054 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 OSBPP22059 807 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 USP17L2Q6R6M4 530 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 GMNCA6NCL1 334 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 PPP1R12AO14974 1030 aaPredicted RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MAGOHP61326 146 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 RESP18Q5W5W9 173 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 MB21D1Q8N884 522 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 SCG3Q8WXD2 468 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 GPR108Q9NPR9 543 aa11.98□□□□□ -0.49
RAD50-201ENST00000378823 DNAJC17Q9NVM6 304 aaKnown RBP11.98□□□□□ -0.49
RAD50-201ENST00000378823 PNMA6FA0A0J9YX94 578 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 FAM95CA0A1B0GW59 222 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 MFAP3LO75121 409 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 OR6B2Q6IFH4 312 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 ALKBH8Q96BT7 664 aaKnown RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 ADA2Q9NZK5 511 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 PI4KBQ9UBF8 816 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 USP21Q9UK80 565 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 PDE4DIPQ5VU43 2346 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 IFNAR1P17181 557 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 NEK2P51955 445 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 RARS2Q5T160 578 aaKnown RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 BTBD6Q96KE9 485 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 INPP5FQ9Y2H2 1132 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 HEY1Q9Y5J3 304 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 MIF4GDA9UHW6 222 aaKnown RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 ANP32DO95626 131 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 LDHAP00338 332 aaKnown RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 EFTUD2Q15029 972 aaKnown RBP eCLIP11.97□□□□□ -0.491e-8■□□□□ 11
RAD50-201ENST00000378823 ANO5Q75V66 913 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 GTSE1Q9NYZ3 720 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 CDC25AP30304 524 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 MTERF2Q49AM1 385 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 RGS9BPQ6ZS82 235 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 MSTO1Q9BUK6 570 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 CHCHD3Q9NX63 227 aaKnown RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 OCM2P0CE71 109 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 GGCXP38435 758 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 KCNA1Q09470 495 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 FTOQ9C0B1 505 aaKnown RBP eCLIP11.97□□□□□ -0.49
RAD50-201ENST00000378823 ARHGAP10A1A4S6 786 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 PRPF3O43395 683 aaKnown RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 CALB1P05937 261 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 HLA-DPA1P20036 260 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 KLHL38Q2WGJ6 581 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 TMCO5AQ8N6Q1 288 aa11.97□□□□□ -0.49
RAD50-201ENST00000378823 GCOM2Q9BZD3 368 aaPredicted RBP11.97□□□□□ -0.49
RAD50-201ENST00000378823 RNF103-CHMP3A0A140T963 221 aa11.96□□□□□ -0.49
RAD50-201ENST00000378823 NDE1Q9NXR1 346 aa11.96□□□□□ -0.49
RAD50-201ENST00000378823 PIK3R2O00459 728 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms