RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 MXI1P50539 228 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 PLCD1P51178 756 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 NEK10Q6ZWH5 1172 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 OMA1Q96E52 524 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 TRPC7Q9HCX4 862 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 OLFML3Q9NRN5 406 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 CLIC5Q9NZA1 410 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 TJP3O95049 919 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 A1BGP04217 495 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ITGA6P23229 1130 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 AP2B1P63010 937 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 MIGA1Q8NAN2 632 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 FAM129AQ9BZQ8 928 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ETNK2Q9NVF9 386 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 EIF3FO00303 357 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ZPR1O75312 459 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 RPS6KA1Q15418 735 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 SPATA16Q9BXB7 569 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 PITPNM3Q9BZ71 974 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 HACD3Q9P035 362 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 KRT13P13646 458 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 MCM7P33993 719 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 CARSP49589 748 aaKnown RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 IL9RQ01113 521 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 LBHD1Q9BQE6 289 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-202ENST00000378161 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 TIMMDC1Q9NPL8 285 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ATAD3AQ9NVI7 634 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 TKTP29401 623 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 PPP1R2P41236 205 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 HALP42357 657 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 PUM3Q15397 648 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF174Q15697 407 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 CNGA3Q16281 694 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 TRIM16LQ309B1 348 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 GRAMD1BQ3KR37 738 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 TSEN2Q8NCE0 465 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 ATP2A3Q93084 1043 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 CEP295NLQ96MC4 621 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 PRMT1Q99873 361 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 RIOK1Q9BRS2 568 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 EHD2Q9NZN4 543 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 CTNND2Q9UQB3 1225 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 GDAP1Q8TB36 358 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 MDM1Q8TC05 714 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 MMRN2Q9H8L6 949 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 SERTAD1Q9UHV2 236 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 TDRKHQ9Y2W6 561 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 ARHGAP42A6NI28 874 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 RAP1GDS1P52306 607 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 DSG1Q02413 1049 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 C6orf89Q6UWU4 347 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
NPHP4-202ENST00000378161 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
NPHP4-202ENST00000378161 PPP6R2O75170 966 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 KRT16P08779 473 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 PAK1Q13153 545 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 MMEL1Q495T6 779 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ARHGEF18Q6ZSZ5 1173 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TNIP2Q8NFZ5 429 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 GRAMD1AQ96CP6 724 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 NGLY1Q96IV0 654 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TIPINQ9BVW5 301 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TEX28O15482 410 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 MTRF1O75570 445 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 PHKG2P15735 406 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 HPCAP84074 193 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 LMNB2Q03252 620 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 HAUS8Q9BT25 410 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 OXCT2Q9BYC2 517 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TBCCD1Q9NVR7 557 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 SNX12Q9UMY4 172 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 PCP4L1A6NKN8 68 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TTLL13PA6NNM8 815 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms