RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LST1-208	ENST00000376093	LY9	Q9HBG7	655 aa		13.73	□□□□□ -0.21
LST1-208	ENST00000376093	MRVI1	Q9Y6F6	885 aa		13.73	□□□□□ -0.21
LST1-208	ENST00000376093	PRC1	O43663	620 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	FGB	P02675	491 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	WEE1	P30291	646 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	MRPS5	P82675	430 aa	Known RBP	13.72	□□□□□ -0.21
LST1-208	ENST00000376093	RASIP1	Q5U651	963 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	NFRKB	Q6P4R8	1299 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	NFXL1	Q6ZNB6	911 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	FCHSD1	Q86WN1	690 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	ZNF654	Q8IZM8	581 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	GALNT6	Q8NCL4	622 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	IL31RA	Q8NI17	732 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	CTCFL	Q8NI51	663 aa	Predicted RBP	13.72	□□□□□ -0.21
LST1-208	ENST00000376093	IGDCC4	Q8TDY8	1250 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	SCARF2	Q96GP6	870 aa	Predicted RBP	13.72	□□□□□ -0.21
LST1-208	ENST00000376093	MTIF3	Q9H2K0	278 aa	Known RBP	13.72	□□□□□ -0.21
LST1-208	ENST00000376093	ANO2	Q9NQ90	1003 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	AVEN	Q9NQS1	362 aa	Predicted RBP	13.72	□□□□□ -0.21
LST1-208	ENST00000376093	MARK1	Q9P0L2	795 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.72	□□□□□ -0.21
LST1-208	ENST00000376093	ZMIZ1	Q9ULJ6	1067 aa		13.72	□□□□□ -0.21
LST1-208	ENST00000376093	PNMA6F	A0A0J9YX94	578 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.71	□□□□□ -0.21
LST1-208	ENST00000376093	SLC27A2	O14975	620 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	EIF3J	O75822	258 aa	Known RBP	13.71	□□□□□ -0.21
LST1-208	ENST00000376093	POLR2M	P0CAP2	368 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	ZNF286B	P0CG31	522 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	HOXB4	P17483	251 aa	Predicted RBP	13.71	□□□□□ -0.21
LST1-208	ENST00000376093	GHRHR	Q02643	423 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	TRAF1	Q13077	416 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	COL9A3	Q14050	684 aa	Predicted RBP	13.71	□□□□□ -0.21
LST1-208	ENST00000376093	PGM5	Q15124	567 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	DEFB128	Q7Z7B8	93 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	EDARADD	Q8WWZ3	215 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	HERVK_113	Q902F9	699 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	NECAB3	Q96P71	396 aa	Predicted RBP	13.71	□□□□□ -0.21
LST1-208	ENST00000376093	PBX4	Q9BYU1	374 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	DDX41	Q9UJV9	622 aa	Known RBP	13.71	□□□□□ -0.21
LST1-208	ENST00000376093	DOCK5	Q9H7D0	1870 aa		13.71	□□□□□ -0.21
LST1-208	ENST00000376093	CCDC69	A6NI79	296 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	DDAH1	O94760	285 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	EPX	P11678	715 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	RXRA	P19793	462 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	CAST	P20810	708 aa	Known RBP	13.7	□□□□□ -0.22
LST1-208	ENST00000376093	CCND2	P30279	289 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	MCM5	P33992	734 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	DGKD	Q16760	1214 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	CREB3L3	Q68CJ9	461 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.7	□□□□□ -0.22
LST1-208	ENST00000376093	RAB11FIP4	Q86YS3	637 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	DHX37	Q8IY37	1157 aa	Known RBP	13.7	□□□□□ -0.22
LST1-208	ENST00000376093	RPUSD2	Q8IZ73	545 aa	Known RBP	13.7	□□□□□ -0.22
LST1-208	ENST00000376093	KAT2B	Q92831	832 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	SUSD3	Q96L08	255 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	ALG1	Q9BT22	464 aa		13.7	□□□□□ -0.22
LST1-208	ENST00000376093	MAP3K20	Q9NYL2	800 aa	Known RBP	13.7	□□□□□ -0.22
LST1-208	ENST00000376093	NOVA2	Q9UNW9	492 aa	Known RBP	13.7	□□□□□ -0.22
LST1-208	ENST00000376093	CNTNAP5	Q8WYK1	1306 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	SH2B2	O14492	632 aa	Predicted RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	PLEKHA8P1	O95397	391 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	KIF5B	P33176	963 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	IRS1	P35568	1242 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	PTPN11	Q06124	597 aa	Predicted RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	ELOA	Q14241	798 aa	Known RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	ADGRE1	Q14246	886 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	PTGIS	Q16647	500 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	CMTR1	Q8N1G2	835 aa	Known RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	SAMD3	Q8N6K7	520 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	RETREG2	Q8NC44	543 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	PPTC7	Q8NI37	304 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	FAM200A	Q8TCP9	573 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	RRP36	Q96EU6	259 aa	Known RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	LRRC2	Q9BYS8	371 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	NKX2-4	Q9H2Z4	354 aa		13.69	□□□□□ -0.22
LST1-208	ENST00000376093	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	TRIP12	Q14669	1992 aa	Predicted RBP	13.69	□□□□□ -0.22
LST1-208	ENST00000376093	NCOR1	O75376	2440 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	GGPS1	O95749	300 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	UBA1	P22314	1058 aa	Known RBP	13.68	□□□□□ -0.22
LST1-208	ENST00000376093	RABGGTB	P53611	331 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	TYRO3	Q06418	890 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	RAB30	Q15771	203 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	GDF6	Q6KF10	455 aa	Predicted RBP	13.68	□□□□□ -0.22
LST1-208	ENST00000376093	VSIG10L	Q86VR7	867 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	VWCE	Q96DN2	955 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	TMEM87B	Q96K49	555 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	SPZ1	Q9BXG8	430 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	C1QTNF1	Q9BXJ1	281 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	SEC63	Q9UGP8	760 aa	Known RBP	13.68	□□□□□ -0.22
LST1-208	ENST00000376093	MSRA	Q9UJ68	235 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	SLC4A7	Q9Y6M7	1214 aa		13.68	□□□□□ -0.22
LST1-208	ENST00000376093	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.67	□□□□□ -0.22
LST1-208	ENST00000376093	PFKM	P08237	780 aa		13.67	□□□□□ -0.22
LST1-208	ENST00000376093	IQCF3	P0C7M6	154 aa		13.67	□□□□□ -0.22
LST1-208	ENST00000376093	SNRPN	P63162	240 aa	Known RBP	13.67	□□□□□ -0.22
LST1-208	ENST00000376093	SFSWAP	Q12872	951 aa	Known RBP	13.67	□□□□□ -0.22
LST1-208	ENST00000376093	BFSP2	Q13515	415 aa		13.67	□□□□□ -0.22
LST1-208	ENST00000376093	NECTIN1	Q15223	517 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms