RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SIT1Q9Y3P8 196 aa14.25□□□□□ -0.13
HDAC8-204ENST00000373560 TRPV2Q9Y5S1 764 aa14.25□□□□□ -0.13
HDAC8-204ENST00000373560 SLC30A4O14863 429 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 SPTLC1O15269 473 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 ORC4O43929 436 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 PPP1R11O60927 126 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 CA8P35219 290 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 IGBP1P78318 339 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 SMC1AQ14683 1233 aaKnown RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 VPS53Q5VIR6 699 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 KCNT2Q6UVM3 1135 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 METTL7BQ6UX53 244 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 CCDC149Q6ZUS6 474 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 GPR161Q8N6U8 529 aaKnown RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 PJA1Q8NG27 643 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 SLC22A17Q8WUG5 538 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 ACSF2Q96CM8 615 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 NACAP1Q9BZK3 213 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 EPC1Q9H2F5 836 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-204ENST00000373560 ZMIZ1Q9ULJ6 1067 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 PCDHB7Q9Y5E2 793 aa14.24□□□□□ -0.13
HDAC8-204ENST00000373560 MYH15Q9Y2K3 1946 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 C1QTNF9BB2RNN3 333 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 C1QTNF9P0C862 333 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
HDAC8-204ENST00000373560 SPEM2Q0P670 501 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 LPAL2Q16609 132 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 STOX1Q6ZVD7 989 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 RSPH3Q86UC2 560 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
HDAC8-204ENST00000373560 ARHGEF3Q9NR81 526 aa14.23□□□□□ -0.13
HDAC8-204ENST00000373560 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-204ENST00000373560 C9IYK1 514 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 GDF9O60383 454 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 PROS1P07225 676 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 FGRP09769 529 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 TGFB3P10600 412 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 GHRHRQ02643 423 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 CSTF1Q05048 431 aaKnown RBP14.22□□□□□ -0.13
HDAC8-204ENST00000373560 N4BP2L1Q5TBK1 243 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-204ENST00000373560 PHLDB3Q6NSJ2 640 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 TSSK4Q6SA08 328 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 OTOP3Q7RTS5 596 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 GPR149Q86SP6 731 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 SLC44A3Q8N4M1 653 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 TRAPPC12Q8WVT3 735 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 TMEM40Q8WWA1 233 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 ADAM2Q99965 735 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 CDHR5Q9HBB8 845 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 TOMM22Q9NS69 142 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 DZANK1Q9NVP4 752 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 PUF60Q9UHX1 559 aaKnown RBP14.22□□□□□ -0.13
HDAC8-204ENST00000373560 MRPL11Q9Y3B7 192 aaKnown RBP14.22□□□□□ -0.13
HDAC8-204ENST00000373560 MTF2Q9Y483 593 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-204ENST00000373560 IGF2RP11717 2491 aa14.22□□□□□ -0.13
HDAC8-204ENST00000373560 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-204ENST00000373560 NT5C1B-RDH14C9J2C7 533 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 LILRB5O75023 590 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 SRFP11831 508 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 CCND2P30279 289 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 NFX1Q12986 1120 aaKnown RBP14.21□□□□□ -0.13
HDAC8-204ENST00000373560 TMEM173Q86WV6 379 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-204ENST00000373560 SLC39A11Q8N1S5 342 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 ZBTB44Q8NCP5 570 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 ZNF558Q96NG5 402 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 CASD1Q96PB1 797 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 MAF1Q9H063 256 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 JMJD4Q9H9V9 463 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 IGSF9Q9P2J2 1179 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 ANAPC4Q9UJX5 808 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 LHX6Q9UPM6 363 aa14.21□□□□□ -0.13
HDAC8-204ENST00000373560 NOC2LQ9Y3T9 749 aaKnown RBP14.21□□□□□ -0.13
HDAC8-204ENST00000373560 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 RAB11FIP3O75154 756 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 TCF7P36402 384 aaPredicted RBP14.2□□□□□ -0.14
HDAC8-204ENST00000373560 ZNF528Q3MIS6 628 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 NETO1Q8TDF5 533 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 INPP4AQ96PE3 977 aaPredicted RBP14.2□□□□□ -0.14
HDAC8-204ENST00000373560 MYADMQ96S97 322 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
HDAC8-204ENST00000373560 VAT1LQ9HCJ6 419 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 TCP11L1Q9NUJ3 509 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 SPATA6Q9NWH7 488 aaPredicted RBP14.2□□□□□ -0.14
HDAC8-204ENST00000373560 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 PCDHGA2Q9Y5H1 932 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 SQORQ9Y6N5 450 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 NBEAQ8NFP9 2946 aa14.2□□□□□ -0.14
HDAC8-204ENST00000373560 SPATA31C2B4DYI2 1134 aa14.19□□□□□ -0.14
HDAC8-204ENST00000373560 CXCL14O95715 111 aa14.19□□□□□ -0.14
HDAC8-204ENST00000373560 ZFYP08048 801 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-204ENST00000373560 SHC2P98077 582 aa14.19□□□□□ -0.14
HDAC8-204ENST00000373560 WTAPQ15007 396 aa14.19□□□□□ -0.14
HDAC8-204ENST00000373560 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
HDAC8-204ENST00000373560 GPATCH4Q5T3I0 446 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms