RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 FTOQ9C0B1 505 aaKnown RBP eCLIP22.75■■□□□ 1.23
SYNC-201ENST00000373484 FAM237AA0A1B0GTK4 181 aa22.74■■□□□ 1.23
SYNC-201ENST00000373484 LAD1O00515 517 aa22.74■■□□□ 1.23
SYNC-201ENST00000373484 NDUFA8P51970 172 aa22.74■■□□□ 1.23
SYNC-201ENST00000373484 HIC1Q14526 733 aa22.74■■□□□ 1.23
SYNC-201ENST00000373484 PLCB4Q15147 1175 aa22.74■■□□□ 1.23
SYNC-201ENST00000373484 CBFA2T2O43439 604 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 ATP4AP20648 1035 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 E4F1Q66K89 784 aaPredicted RBP22.73■■□□□ 1.23
SYNC-201ENST00000373484 NCAPH2Q6IBW4 605 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 SH3RF1Q7Z6J0 888 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 ELOA2Q8IYF1 753 aaPredicted RBP22.73■■□□□ 1.23
SYNC-201ENST00000373484 CTAGE1Q96RT6 745 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 TBX21Q9UL17 535 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 PHLPP2Q6ZVD8 1323 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 CEP290O15078 2479 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 SLFN14P0C7P3 912 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 H2AFXP16104 143 aaPredicted RBP22.73■■□□□ 1.23
SYNC-201ENST00000373484 EPHA7Q15375 998 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 PTGISQ16647 500 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 UGCGQ16739 394 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 PPP1R13BQ96KQ4 1090 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 PRDM5Q9NQX1 630 aaPredicted RBP22.73■■□□□ 1.23
SYNC-201ENST00000373484 TMEM39AQ9NV64 488 aa22.73■■□□□ 1.23
SYNC-201ENST00000373484 NRCAMQ92823 1304 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 POTEB3A0JP26 581 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 C17orf102A2RUQ5 167 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 KIAA0355O15063 1070 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 ATP2C1P98194 919 aaPredicted RBP22.72■■□□□ 1.23
SYNC-201ENST00000373484 POTEBQ6S5H4 581 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 ATP8B4Q8TF62 1192 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 LMBR1Q8WVP7 490 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 XPO4Q9C0E2 1151 aaKnown RBP22.72■■□□□ 1.23
SYNC-201ENST00000373484 SETD4Q9NVD3 440 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 TRPC6Q9Y210 931 aa22.72■■□□□ 1.23
SYNC-201ENST00000373484 TANC1Q9C0D5 1861 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 TRIM43BA6NCK2 446 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 POTEMA6NI47 508 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ZNF862O60290 1169 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 PRPHP41219 470 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ADAM17P78536 824 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ZNF200P98182 395 aaPredicted RBP22.71■■□□□ 1.23
SYNC-201ENST00000373484 PPFIA1Q13136 1202 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 BMS1Q14692 1282 aaKnown RBP22.71■■□□□ 1.23
SYNC-201ENST00000373484 TERF2Q15554 542 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ATP6V0A1Q93050 837 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 TRIM43Q96BQ3 446 aaPredicted RBP22.71■■□□□ 1.23
SYNC-201ENST00000373484 PRKAG2Q9UGJ0 569 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 TUBE1Q9UJT0 475 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ZMYND8Q9ULU4 1186 aaPredicted RBP22.71■■□□□ 1.23
SYNC-201ENST00000373484 EVPLQ92817 2033 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ARID2Q68CP9 1835 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 ZNF202O95125 648 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 P4HBP07237 508 aaKnown RBP22.71■■□□□ 1.23
SYNC-201ENST00000373484 GNAT1P11488 350 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 INSRRP14616 1297 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 SYN1P17600 705 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 TECP42680 631 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 FXR2P51116 673 aaKnown RBP eCLIP22.71■■□□□ 1.23
SYNC-201ENST00000373484 NCAPHQ15003 741 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 DPCR1Q3MIW9 517 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 BANK1Q8NDB2 785 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 BBXQ8WY36 941 aaPredicted RBP22.71■■□□□ 1.23
SYNC-201ENST00000373484 NOD1Q9Y239 953 aa22.71■■□□□ 1.23
SYNC-201ENST00000373484 A0A1B0GVL5 298 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 HBP1O60381 514 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 PPP6R2O75170 966 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 TPM1P09493 284 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 PRKCEQ02156 737 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 NAA30Q147X3 362 aaPredicted RBP22.7■■□□□ 1.22
SYNC-201ENST00000373484 SLC39A14Q15043 492 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 GRIK4Q16099 956 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 TMEM266Q2M3C6 531 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 AXDND1Q5T1B0 1012 aaPredicted RBP22.7■■□□□ 1.22
SYNC-201ENST00000373484 ARMCX5Q6P1M9 558 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 FBXO38Q6PIJ6 1188 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 FAM167AQ96KS9 214 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 IFNKQ9P0W0 207 aa22.7■■□□□ 1.22
SYNC-201ENST00000373484 BMP15O95972 392 aa22.69■■□□□ 1.22
SYNC-201ENST00000373484 CYP2C9P11712 490 aa22.69■■□□□ 1.22
SYNC-201ENST00000373484 QARSP47897 775 aaKnown RBP22.69■■□□□ 1.22
SYNC-201ENST00000373484 PSMC5P62195 406 aa22.69■■□□□ 1.22
SYNC-201ENST00000373484 ZNF771Q7L3S4 317 aaPredicted RBP22.69■■□□□ 1.22
SYNC-201ENST00000373484 TRMT1Q9NXH9 659 aaKnown RBP22.69■■□□□ 1.22
SYNC-201ENST00000373484 COL1A2P08123 1366 aa22.69■■□□□ 1.22
SYNC-201ENST00000373484 RRN3P2A6NIE6 340 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 H0YGN5 161 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 TREHO43280 583 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 SMC2O95347 1197 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 OATP04181 439 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 ETF1P62495 437 aaKnown RBP22.68■■□□□ 1.22
SYNC-201ENST00000373484 TMC6Q7Z403 805 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 NEK9Q8TD19 979 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 EIF2AK1Q9BQI3 630 aaKnown RBP22.68■■□□□ 1.22
SYNC-201ENST00000373484 NOC4LQ9BVI4 516 aaKnown RBP22.68■■□□□ 1.22
SYNC-201ENST00000373484 CEP131Q9UPN4 1083 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 CLIC4Q9Y696 253 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 ATP8B1O43520 1251 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 ITGB8P26012 769 aa22.68■■□□□ 1.22
SYNC-201ENST00000373484 PTK7Q13308 1070 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms