RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 STIM2Q9P246 746 aa26.04■■□□□ 1.76
CDK9-201ENST00000373264 ITIH3Q06033 890 aa26.04■■□□□ 1.76
CDK9-201ENST00000373264 CFAP221Q4G0U5 840 aa26.04■■□□□ 1.76
CDK9-201ENST00000373264 CPXCR1Q8N123 301 aa26.04■■□□□ 1.76
CDK9-201ENST00000373264 MRPL11Q9Y3B7 192 aaKnown RBP26.04■■□□□ 1.76
CDK9-201ENST00000373264 ZNF536O15090 1300 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 SLC16A3O15427 465 aaKnown RBP26.03■■□□□ 1.76
CDK9-201ENST00000373264 GAP43P17677 238 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 NOP2P46087 812 aaKnown RBP26.03■■□□□ 1.76
CDK9-201ENST00000373264 TXLNBQ8N3L3 684 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 ZNF341Q9BYN7 854 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 FRMPD4Q14CM0 1322 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 DDX3XO00571 662 aaKnown RBP eCLIP26.03■■□□□ 1.762e-8■■■□□ 14.7
CDK9-201ENST00000373264 TTLL6Q8N841 843 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 OLIG1Q8TAK6 271 aa26.03■■□□□ 1.76
CDK9-201ENST00000373264 INPP4AQ96PE3 977 aaPredicted RBP26.03■■□□□ 1.76
CDK9-201ENST00000373264 CCDC66A2RUB6 948 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 TMCO5BA8MYB1 307 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 HIP1RO75146 1068 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 EGFRP00533 1210 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 CAPN2P17655 700 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 CCDC70Q6NSX1 233 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 KRT12Q99456 494 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 METTL14Q9HCE5 456 aaKnown RBP26.02■■□□□ 1.76
CDK9-201ENST00000373264 MED4Q9NPJ6 270 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 AGPAT3Q9NRZ7 376 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 CCPG1Q9ULG6 757 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 STK24Q9Y6E0 443 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 MYH11P35749 1972 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 PSMC2P35998 433 aaKnown RBP26.02■■□□□ 1.76
CDK9-201ENST00000373264 CARSP49589 748 aaKnown RBP26.02■■□□□ 1.76
CDK9-201ENST00000373264 MAPK7Q13164 816 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 B3GNT9Q6UX72 402 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 ZSWIM2Q8NEG5 633 aa26.02■■□□□ 1.76
CDK9-201ENST00000373264 LUC7LQ9NQ29 371 aaKnown RBP26.02■■□□□ 1.76
CDK9-201ENST00000373264 TNS1Q9HBL0 1735 aaKnown RBP26.01■■□□□ 1.75
CDK9-201ENST00000373264 FAM153BP0C7A2 387 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 DPEP1P16444 411 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 FAM153CQ494X1 144 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 FOXR1Q6PIV2 292 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 NACC1Q96RE7 527 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 FAM153AQ9UHL3 310 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 SYNPO2Q9UMS6 1093 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 PSME4Q14997 1843 aa26.01■■□□□ 1.75
CDK9-201ENST00000373264 KCNK3O14649 394 aa26■■□□□ 1.75
CDK9-201ENST00000373264 EIF3DO15371 548 aaKnown RBP eCLIP26■■□□□ 1.75
CDK9-201ENST00000373264 KCNA3P22001 575 aa26■■□□□ 1.75
CDK9-201ENST00000373264 ZSCAN26Q16670 478 aa26■■□□□ 1.75
CDK9-201ENST00000373264 U2AF1L4Q8WU68 220 aaKnown RBP26■■□□□ 1.75
CDK9-201ENST00000373264 TEKT3Q9BXF9 490 aa26■■□□□ 1.75
CDK9-201ENST00000373264 ACBD3Q9H3P7 528 aa26■■□□□ 1.75
CDK9-201ENST00000373264 PCIF1Q9H4Z3 704 aa26■■□□□ 1.75
CDK9-201ENST00000373264 KCNH7Q9NS40 1196 aa26■■□□□ 1.75
CDK9-201ENST00000373264 PGAP2Q9UHJ9 254 aa26■■□□□ 1.75
CDK9-201ENST00000373264 TULP1O00294 542 aaPredicted RBP26■■□□□ 1.75
CDK9-201ENST00000373264 FMO5P49326 533 aa26■■□□□ 1.75
CDK9-201ENST00000373264 ZNF131P52739 623 aa26■■□□□ 1.75
CDK9-201ENST00000373264 LNX1Q8TBB1 728 aaPredicted RBP26■■□□□ 1.75
CDK9-201ENST00000373264 HOOK2Q96ED9 719 aa26■■□□□ 1.75
CDK9-201ENST00000373264 MXRA8Q9BRK3 442 aa26■■□□□ 1.75
CDK9-201ENST00000373264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26■■□□□ 1.751e-32■■■■■ 782.6
CDK9-201ENST00000373264 EVI5O60447 810 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 DLG4P78352 724 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 SPP2Q13103 211 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 ITGB3BPQ13352 177 aaPredicted RBP25.99■■□□□ 1.75
CDK9-201ENST00000373264 ZNF772Q68DY9 489 aaPredicted RBP25.99■■□□□ 1.75
CDK9-201ENST00000373264 KLHL7Q8IXQ5 586 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 IFT81Q8WYA0 676 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 PSD3Q9NYI0 1048 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 NFU1Q9UMS0 254 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 WNT10BO00744 389 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 PTGER2P43116 358 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 GUCY2DQ02846 1103 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 GLYCTKQ8IVS8 523 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 LRRC57Q8N9N7 239 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 EPB41L5Q9HCM4 733 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 KIF13BQ9NQT8 1826 aa25.99■■□□□ 1.75
CDK9-201ENST00000373264 GOLGA6BA6NDN3 693 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 HEXIM1O94992 359 aaKnown RBP25.98■■□□□ 1.75
CDK9-201ENST00000373264 PRKCIP41743 596 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 MUM1L1Q5H9M0 696 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 GPR88Q9GZN0 384 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 RAVER2Q9HCJ3 691 aaKnown RBP25.98■■□□□ 1.75
CDK9-201ENST00000373264 FEM1BQ9UK73 627 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 NENFQ9UMX5 172 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 ARHGEF35A5YM69 484 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 CLEC4DQ8WXI8 215 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 TSKSQ9UJT2 592 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 DNAJC12Q9UKB3 198 aa25.98■■□□□ 1.75
CDK9-201ENST00000373264 ALAS1P13196 640 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 DRAP1Q14919 205 aaPredicted RBP25.97■■□□□ 1.75
CDK9-201ENST00000373264 PADI6Q6TGC4 694 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 PALB2Q86YC2 1186 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 OSGEPQ9NPF4 335 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 STK32BQ9NY57 414 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 F8VZ95 297 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 DHX15O43143 795 aaKnown RBP25.97■■□□□ 1.75
CDK9-201ENST00000373264 CXCL9Q07325 125 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 ARHGAP44Q17R89 818 aa25.97■■□□□ 1.75
CDK9-201ENST00000373264 AP1M1Q9BXS5 423 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms