RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 WDR62O43379 1518 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 M0QYV0 167 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 PRR29P0C7W0 189 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 SLC44A5Q8NCS7 719 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 SAAL1Q96ER3 474 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 ADAMTS1Q9UHI8 967 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 CA4P22748 312 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 SOX11P35716 441 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 TMPRSS15P98073 1019 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 FKBP3Q00688 224 aaKnown RBP19.45■□□□□ 0.7
SNX27-202ENST00000368841 ZNF699Q32M78 642 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 YIPF2Q9BWQ6 316 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 E2F6O75461 281 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 ZBTB7AO95365 584 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 PSMC5P62195 406 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 RPAINQ86UA6 219 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 SLC7A5P2Q9GIP4 190 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 ABCB6Q9NP58 842 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 GOLGA8QA0A0J9YX86 632 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 GOLGA8OA6NCC3 632 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 GOLGA8NF8WBI6 632 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 NDUFA10O95299 355 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 TBC1D1Q86TI0 1168 aaPredicted RBP19.45■□□□□ 0.7
SNX27-202ENST00000368841 DNAJC12Q9UKB3 198 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 ARAP3Q8WWN8 1544 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 CRKP46108 304 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 SNX24Q9Y343 169 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 PZPP20742 1482 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 DAB2P98082 770 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 KRT31Q15323 416 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 NDST4Q9H3R1 872 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 ATP10AO60312 1499 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 UBA6A0AVT1 1052 aaPredicted RBP19.44■□□□□ 0.7
SNX27-202ENST00000368841 E9PMD0 336 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 TTI1O43156 1089 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 CHEK2O96017 543 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 WRNIP1Q96S55 665 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 SLC13A1Q9BZW2 595 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 THAP9Q9H5L6 903 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 MAGEF1Q9HAY2 307 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 LUC7L3O95232 432 aaKnown RBP19.44■□□□□ 0.7
SNX27-202ENST00000368841 HLA-DPA1P20036 260 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 ATP6V1E1P36543 226 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 GPC3P51654 580 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 CENPUQ71F23 418 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 SFR1Q86XK3 245 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 EXOC8Q8IYI6 725 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 JRKLQ9Y4A0 524 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 NPHP3-ACAD11A0A0J9YXS1 232 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 LINC00301Q8NCQ3 95 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 CUEDC2Q9H467 287 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 CCDC85BQ15834 202 aaPredicted RBP19.44■□□□□ 0.7
SNX27-202ENST00000368841 FBXO41Q8TF61 875 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 PBKQ96KB5 322 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 TRPC7Q9HCX4 862 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 KIF17Q9P2E2 1029 aa19.44■□□□□ 0.7
SNX27-202ENST00000368841 PPARGC1AQ9UBK2 798 aaKnown RBP19.44■□□□□ 0.7
SNX27-202ENST00000368841 USP17L10C9JJH3 530 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 SNRNP48Q6IEG0 339 aaKnown RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 PIDD1Q9HB75 910 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 E2F8A0AVK6 867 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 CCDC78A2IDD5 438 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 NUGGCQ68CJ6 796 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 LMBRD2Q68DH5 695 aaPredicted RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 TAS2R42Q7RTR8 314 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 SCAF8Q9UPN6 1271 aaKnown RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 IQANK1A0A1B0GTG1 560 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 DPYSL4O14531 572 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 SIK2Q9H0K1 926 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 PTPRTO14522 1441 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 E5RI56 91 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 SYF2O95926 243 aaKnown RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 SLC9A5Q14940 896 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 CYB5R4Q7L1T6 521 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 TRIM42Q8IWZ5 723 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 RNF168Q8IYW5 571 aaPredicted RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 OXER1Q8TDS5 423 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 NDFIP2Q9NV92 336 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 BLMP54132 1417 aaPredicted RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 TADA3O75528 432 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 MMP10P09238 476 aa19.43■□□□□ 0.7
SNX27-202ENST00000368841 MKRN4PQ13434 485 aaPredicted RBP19.43■□□□□ 0.7
SNX27-202ENST00000368841 NR1D1P20393 614 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 MCAMP43121 646 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 SWSAP1Q6NVH7 229 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 CCNYL1Q8N7R7 359 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 RMDN3Q96TC7 470 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 ZNF667Q5HYK9 610 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 KIAA1755Q5JYT7 1200 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 RABGGTAQ92696 567 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 LBHD1Q9BQE6 289 aaPredicted RBP19.42■□□□□ 0.7
SNX27-202ENST00000368841 CCDC90BQ9GZT6 254 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 DCTN4Q9UJW0 460 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 L3MBTL1Q9Y468 752 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 CLDN3O15551 220 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 PAMP19021 973 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 CIITAP33076 1130 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 ZFYVE19Q96K21 471 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 ALG13Q9NP73 1137 aaKnown RBP19.42■□□□□ 0.7
SNX27-202ENST00000368841 HPCAL4Q9UM19 191 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms