RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 COL4A6Q14031 1691 aa11.21□□□□□ -0.62
TPM3-210ENST00000368530 MEIS2O14770 477 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 CUTAO60888 179 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 STAM2O75886 525 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 CHRNA1P02708 482 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 CTSHP09668 335 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 CMA1P23946 247 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 GRIN1Q05586 938 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 SPECC1Q5M775 1068 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
TPM3-210ENST00000368530 TMEM192Q8IY95 271 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 SAMD11Q96NU1 681 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 FUCA2Q9BTY2 467 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 EHMT1Q9H9B1 1298 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 FBXO2Q9UK22 296 aaPredicted RBP11.2□□□□□ -0.62
TPM3-210ENST00000368530 PCDHA6Q9UN73 950 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 PCDHA8Q9Y5H6 950 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 MICAL3Q7RTP6 2002 aa11.2□□□□□ -0.62
TPM3-210ENST00000368530 CCDC194A0A1B0GVG4 234 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 UPP2O95045 317 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 LTBRP36941 435 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 TYRO3Q06418 890 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 TRAF1Q13077 416 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 GPM6BQ13491 265 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 NEDD9Q14511 834 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 TCEAL5Q5H9L2 206 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 RESP18Q5W5W9 173 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 RPAINQ86UA6 219 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 BANK1Q8NDB2 785 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 CCDC12Q8WUD4 166 aaPredicted RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 LMBR1Q8WVP7 490 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 ERCC4Q92889 916 aaPredicted RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 PABPC5Q96DU9 382 aaKnown RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 SENP7Q9BQF6 1050 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 RC3H2Q9HBD1 1191 aaKnown RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 C5orf67F2Z3F1 127 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 H3BQ06 376 aaPredicted RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 STK25O00506 426 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 ATP9AO75110 1047 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 CCDC192P0DO97 292 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 MCM7P33993 719 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 SYKP43405 635 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 PSEN1P49768 467 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 MGAT3Q09327 533 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
TPM3-210ENST00000368530 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 PCNX4Q63HM2 1172 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 SASS6Q6UVJ0 657 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 DAGLBQ8NCG7 672 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 YME1L1Q96TA2 773 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 SDF4Q9BRK5 362 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 HCN4Q9Y3Q4 1203 aa11.19□□□□□ -0.62
TPM3-210ENST00000368530 GSTTP1A0A1W2PQM5 241 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 PRR33A8MZF0 331 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 M0R2N6 131 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 PIK3CDO00329 1044 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
TPM3-210ENST00000368530 ZNF202O95125 648 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 GNAT1P11488 350 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 ADCY7P51828 1080 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 PTPROQ16827 1216 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 INF2Q27J81 1249 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
TPM3-210ENST00000368530 MARCH8Q5T0T0 291 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 JAKMIP3Q5VZ66 844 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 RUFY4Q6ZNE9 571 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 RBM43Q6ZSC3 357 aaKnown RBP11.18□□□□□ -0.62
TPM3-210ENST00000368530 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 CRIPAKQ8N1N5 446 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 APBB2Q92870 758 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 IFIH1Q9BYX4 1025 aaKnown RBP11.18□□□□□ -0.62
TPM3-210ENST00000368530 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
TPM3-210ENST00000368530 SRPRBQ9Y5M8 271 aaKnown RBP11.18□□□□□ -0.62
TPM3-210ENST00000368530 NRCAMQ92823 1304 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 A0A087WWV3 80 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 ENPP3O14638 875 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 KCNA2P16389 499 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 GNA11P29992 359 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 BMPR1AP36894 532 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 TRAPPC10P48553 1259 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 ARHGAP4P98171 946 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 ZP2Q05996 745 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 PTGDRQ13258 359 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 CAMK1Q14012 370 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 LPIN1Q14693 890 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 TIGD5Q53EQ6 642 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms