RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SEPT9Q9UHD8 586 aaPredicted RBP21.29■■□□□ 1
CKS1B-203ENST00000368439 ARID2Q68CP9 1835 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 PRRC2BQ5JSZ5 2229 aaKnown RBP21.28■■□□□ 1
CKS1B-203ENST00000368439 LPXNO60711 386 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 BAG4O95429 457 aaKnown RBP21.28■■□□□ 1
CKS1B-203ENST00000368439 P4HBP07237 508 aaKnown RBP21.28■■□□□ 1
CKS1B-203ENST00000368439 QARSP47897 775 aaKnown RBP21.28■■□□□ 1
CKS1B-203ENST00000368439 SAFBQ15424 915 aaKnown RBP eCLIP21.28■■□□□ 1
CKS1B-203ENST00000368439 MTERF2Q49AM1 385 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 TMX3Q96JJ7 454 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 PPP1R16BQ96T49 567 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 OSMRQ99650 979 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 SH2D3AQ9BRG2 576 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 FTHL17Q9BXU8 183 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 TSPYL2Q9H2G4 693 aaPredicted RBP21.28■■□□□ 1
CKS1B-203ENST00000368439 GINS2Q9Y248 185 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 RALGAPA2Q2PPJ7 1873 aa21.28■■□□□ 1
CKS1B-203ENST00000368439 NEMFO60524 1076 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 IGFBP4P22692 258 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 TBC1D8BQ0IIM8 1120 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 DRP2Q13474 957 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 CALCRLQ16602 461 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 FAM184AQ8NB25 1140 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 TGS1Q96RS0 853 aaKnown RBP21.27■■□□□ 1
CKS1B-203ENST00000368439 TMEM60Q9H2L4 133 aa21.27■■□□□ 1
CKS1B-203ENST00000368439 DDX11L8A8MPP1 907 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 MARCH6O60337 910 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 MGEA5O60502 916 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 MAFO75444 373 aaPredicted RBP21.26■□□□□ 0.99
CKS1B-203ENST00000368439 RPS6KA5O75582 802 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 TMOD1P28289 359 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 NLRP11P59045 1033 aaKnown RBP21.26■□□□□ 0.99
CKS1B-203ENST00000368439 GRB10Q13322 594 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 PLA2G4FQ68DD2 849 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 NCAPH2Q6IBW4 605 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 FAM228AQ86W67 206 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 C4orf19Q8IY42 314 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 ZNF579Q8NAF0 562 aaKnown RBP21.26■□□□□ 0.99
CKS1B-203ENST00000368439 ZNF689Q96CS4 500 aaPredicted RBP21.26■□□□□ 0.99
CKS1B-203ENST00000368439 DYDC2Q96IM9 177 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 MAP7D2Q96T17 732 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 YME1L1Q96TA2 773 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 SUGCTQ9HAC7 445 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 RGL1Q9NZL6 768 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 ST3GAL5Q9UNP4 418 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 AKT3Q9Y243 479 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 MTCH2Q9Y6C9 303 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 A0A0C4DFX4 3053 aa21.26■□□□□ 0.99
CKS1B-203ENST00000368439 LINC00271P0C7V0 271 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 GPC3P51654 580 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 NFX1Q12986 1120 aaKnown RBP21.25■□□□□ 0.99
CKS1B-203ENST00000368439 FAM43BQ6ZT52 329 aaPredicted RBP21.25■□□□□ 0.99
CKS1B-203ENST00000368439 ZNF710Q8N1W2 664 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 HSD17B14Q9BPX1 270 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 LXNQ9BS40 222 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 C17orf80Q9BSJ5 609 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 TTC12Q9H892 705 aaPredicted RBP21.25■□□□□ 0.99
CKS1B-203ENST00000368439 PCDHA12Q9UN75 941 aa21.25■□□□□ 0.99
CKS1B-203ENST00000368439 SPTBN5Q9NRC6 3674 aaKnown RBP21.25■□□□□ 0.99
CKS1B-203ENST00000368439 DKC1O60832 514 aaKnown RBP eCLIP21.24■□□□□ 0.99
CKS1B-203ENST00000368439 DGKIO75912 1065 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 SLITRK3O94933 977 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 U2AF2P26368 475 aaKnown RBP eCLIP21.24■□□□□ 0.99
CKS1B-203ENST00000368439 TXKP42681 527 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 NPEPPSP55786 919 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 CTTNQ14247 550 aaKnown RBP21.24■□□□□ 0.99
CKS1B-203ENST00000368439 NOSTRINQ8IVI9 506 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.24■□□□□ 0.99
CKS1B-203ENST00000368439 BACH2Q9BYV9 841 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 CYP26B1Q9NR63 512 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 MTUS1Q9ULD2 1270 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 KIAA1671Q9BY89 1806 aa21.24■□□□□ 0.99
CKS1B-203ENST00000368439 ZBTB39O15060 712 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 GPR182O15218 404 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 ATP2B1P20020 1258 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 MCM7P33993 719 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 MCM2P49736 904 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 CYP4A11Q02928 519 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 DSC3Q14574 896 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 GDPD5Q8WTR4 605 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 ZNF668Q96K58 619 aaPredicted RBP21.23■□□□□ 0.99
CKS1B-203ENST00000368439 EIF2AK1Q9BQI3 630 aaKnown RBP21.23■□□□□ 0.99
CKS1B-203ENST00000368439 ZSWIM4Q9H7M6 989 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 RGS18Q9NS28 235 aa21.23■□□□□ 0.99
CKS1B-203ENST00000368439 FNDC1Q4ZHG4 1894 aaPredicted RBP21.23■□□□□ 0.99
CKS1B-203ENST00000368439 EIF4BP23588 611 aaKnown RBP21.22■□□□□ 0.99
CKS1B-203ENST00000368439 YWHABP31946 246 aaKnown RBP21.22■□□□□ 0.99
CKS1B-203ENST00000368439 ORC2Q13416 577 aaPredicted RBP21.22■□□□□ 0.99
CKS1B-203ENST00000368439 ZNF174Q15697 407 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 CCDC85BQ15834 202 aaPredicted RBP21.22■□□□□ 0.99
CKS1B-203ENST00000368439 ODR4Q5SWX8 454 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 NPAS4Q8IUM7 802 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 PPM1EQ8WY54 764 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 DHX33Q9H6R0 707 aaKnown RBP21.22■□□□□ 0.99
CKS1B-203ENST00000368439 PRDM6Q9NQX0 595 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 PPME1Q9Y570 386 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 ADGRA3Q8IWK6 1321 aa21.22■□□□□ 0.99
CKS1B-203ENST00000368439 C9IYK1 514 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 LYPLA2O95372 231 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 DARSP14868 501 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms