RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PRELPP51888 382 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 ODR4Q5SWX8 454 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 BANK1Q8NDB2 785 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 SLC5A5Q92911 643 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 ZBTB21Q9ULJ3 1066 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 DDX3XO00571 662 aaKnown RBP eCLIP19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 JAM2P57087 298 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 PPP2R5CQ13362 524 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 ZNF720Q7Z2F6 126 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 USP38Q8NB14 1042 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 BCS1LQ9Y276 419 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 TULP1O00294 542 aaPredicted RBP19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 KIF4AO95239 1232 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 TRMT1LQ7Z2T5 733 aaKnown RBP19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 RUBCNQ92622 972 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 ARL8AQ96BM9 186 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 PRKCIP41743 596 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 C10orf76Q5T2E6 689 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 FIZ1Q96SL8 496 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 AP1M1Q9BXS5 423 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 TMEM39BQ9GZU3 492 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 GDF3Q9NR23 364 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 ZNF70Q9UC06 446 aaPredicted RBP19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 RAD51CO43502 376 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 CBWD6Q4V339 395 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 CBWD3Q5JTY5 395 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 CBWD5Q5RIA9 395 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 CASKIN2Q8WXE0 1202 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 RSPH14Q9UHP6 348 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 EVI5O60447 810 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 H2AFZP0C0S5 128 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 DLGAP5Q15398 846 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 H2AFVQ71UI9 128 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 LRRC57Q8N9N7 239 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 CHURC1Q8WUH1 139 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 RABEP2Q9H5N1 569 aa19.74■□□□□ 0.75
UBQLN4-201ENST00000368309 HSF2BPO75031 334 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 TTC19Q6DKK2 380 aaPredicted RBP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 VPS36Q86VN1 386 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 LDHDQ86WU2 507 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 GLYCTKQ8IVS8 523 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 TPCN2Q8NHX9 752 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 NACC1Q96RE7 527 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 RUFY1Q96T51 708 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 EIF3DO15371 548 aaKnown RBP eCLIP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 PPP1R12BO60237 982 aaPredicted RBP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 KRT14P02533 472 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 VIL1P09327 827 aaKnown RBP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 FMO5P49326 533 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 HS2ST1Q7LGA3 356 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 CAVIN3Q969G5 261 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 CCDC43Q96MW1 224 aaKnown RBP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 ZIM3Q96PE6 472 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 LXNQ9BS40 222 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 AGBL1Q96MI9 1066 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 SH2D3AQ9BRG2 576 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 RANBP17Q9H2T7 1088 aaKnown RBP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 AGPAT3Q9NRZ7 376 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 DNAJC12Q9UKB3 198 aa19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 MRPL11Q9Y3B7 192 aaKnown RBP19.73■□□□□ 0.75
UBQLN4-201ENST00000368309 BTNL10A8MVZ5 291 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 IPO5O00410 1097 aaKnown RBP19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 IVLP07476 585 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 STAT1P42224 750 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 DRAP1Q14919 205 aaPredicted RBP19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 KCTD16Q68DU8 428 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 SRCAPQ6ZRS2 3230 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 PEX26Q7Z412 305 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 SYCP3Q8IZU3 236 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 METTL13Q8N6R0 699 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 FAM151AQ8WW52 585 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 FRMD4BQ9Y2L6 1034 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 TNFRSF8P28908 595 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 GALCP54803 685 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 IRX5P78411 483 aaPredicted RBP19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 SLC15A2Q16348 729 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 ARHGAP44Q17R89 818 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 DAAM2Q86T65 1068 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 LNX1Q8TBB1 728 aaPredicted RBP19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 VCPKMTQ9H867 229 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 FBXL5Q9UKA1 691 aa19.72■□□□□ 0.75
UBQLN4-201ENST00000368309 RPS6KA5O75582 802 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 ABCB4P21439 1286 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 IFI16Q16666 785 aaKnown RBP19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 SH3GL2Q99962 352 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 OSGEPQ9NPF4 335 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 TULP2O00295 520 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 TRAF1Q13077 416 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 PAK2Q13177 524 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 TTMPQ5BVD1 217 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 ALS2CLQ60I27 953 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 RSBN1LQ6PCB5 846 aaPredicted RBP19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 OGFOD1Q8N543 542 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 HOOK2Q96ED9 719 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 PCIF1Q9H4Z3 704 aa19.71■□□□□ 0.75
UBQLN4-201ENST00000368309 GTPBP10A4D1E9 387 aaKnown RBP19.7■□□□□ 0.74
UBQLN4-201ENST00000368309 ARHGEF35A5YM69 484 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms