RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 GIMAP8Q8ND71 665 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 MCPH1Q8NEM0 835 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 COX16Q9P0S2 106 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 SLIT1O75093 1534 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 IQANK1A0A1B0GTG1 560 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 CHRNA3P32297 505 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 FAM83BQ5T0W9 1011 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 KAZNQ674X7 775 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 BZW1Q7L1Q6 419 aaKnown RBP9.68□□□□□ -0.86
SYNE1-205ENST00000367251 METTL23Q86XA0 190 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 RTKN2Q8IZC4 609 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 TCP11Q8WWU5 503 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 BHMT2Q9H2M3 363 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 THEGQ9P2T0 379 aa9.68□□□□□ -0.86
SYNE1-205ENST00000367251 A0A1W2PQJ5 194 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 ARHGAP42A6NI28 874 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 NBPF26B4DH59 902 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 TJP3O95049 919 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 FDX1P10109 184 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 SFNP31947 248 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 PTPN21Q16825 1174 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 NBPF10Q6P3W6 841 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 NBPF15Q8N660 670 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 FAM96AQ9H5X1 160 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 OLA1Q9NTK5 396 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 KIDINS220Q9ULH0 1771 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 TTI1O43156 1089 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 FGGP02679 453 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 NR1I3Q14994 352 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 GJB4Q9NTQ9 266 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 SSU72P8A0A1W2PR75 194 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 TTC26A0AVF1 554 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 USP27XA6NNY8 438 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 POC1B-GALNT4F8VUJ3 575 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 LRRN2O75325 713 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 DCTN3O75935 186 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 SLC4A1P02730 911 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 TXNRD1Q16881 649 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 SUPT20HL1Q3ZLR7 823 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 EEF2KMTQ96G04 330 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 WNT8AQ9H1J5 351 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 CD209Q9NNX6 404 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 FGFR1OP2Q9NVK5 253 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 ANGPTL3Q9Y5C1 460 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 COL3A1P02461 1466 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 CTIFO43310 598 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 RHOBTB3O94955 611 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 MT-ND3P03897 115 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 S100BP04271 92 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 HNRNPH2P55795 449 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 DHX34Q14147 1143 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 CCDC93Q567U6 631 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 ZNF772Q68DY9 489 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 XXYLT1Q8NBI6 393 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 FAM167AQ96KS9 214 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 ARHGEF37A1IGU5 675 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 GDF11O95390 407 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 CPP00450 1065 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 KRT76Q01546 638 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 PTPROQ16827 1216 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 TTBK2Q6IQ55 1244 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 SFR1Q86XK3 245 aa9.67□□□□□ -0.86
SYNE1-205ENST00000367251 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
SYNE1-205ENST00000367251 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 PDXKO00764 312 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 MAPK13O15264 365 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 SRGNP10124 158 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TMED2Q15363 201 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 HSP90AA5PQ58FG0 334 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 ATG16L1Q676U5 607 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 RNF207Q6ZRF8 634 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 SRRM1Q8IYB3 904 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 ADSSL1Q8N142 457 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 KLHL29Q96CT2 875 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TRIM56Q9BRZ2 755 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 MTIF3Q9H2K0 278 aaKnown RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 PCIF1Q9H4Z3 704 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TAF1DQ9H5J8 278 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TUFT1Q9NNX1 390 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 ADGRB2O60241 1585 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 EXOC1LA0A1B0GW35 172 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 HGSO14964 777 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TBX3O15119 743 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 CALB1P05937 261 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 ASNSP08243 561 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 CYP2D6P10635 497 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 RFX5P48382 616 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 DRP2Q13474 957 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 C12orf60Q5U649 245 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TTC19Q6DKK2 380 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-205ENST00000367251 TRIM72Q6ZMU5 477 aa9.66□□□□□ -0.86
SYNE1-205ENST00000367251 PPLO60437 1756 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms