RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 ITGB5P18084 799 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 DNAJB1P25685 340 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 GNA11P29992 359 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 AVPR2P30518 371 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 SP4Q02446 784 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 CBX2Q14781 532 aaPredicted RBP9.26□□□□□ -0.93
MRPL55-211ENST00000366738 UTP14CQ5TAP6 766 aaKnown RBP9.26□□□□□ -0.93
MRPL55-211ENST00000366738 PCNX4Q63HM2 1172 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 MCTP1Q6DN14 999 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 PIK3AP1Q6ZUJ8 805 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 FAM177A1Q8N128 213 aaPredicted RBP9.26□□□□□ -0.93
MRPL55-211ENST00000366738 SMRP1Q8NCR6 262 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 LMBR1Q8WVP7 490 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 ZBTB10Q96DT7 871 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 ASIC4Q96FT7 647 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 RPGRIP1Q96KN7 1286 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 ANO3Q9BYT9 981 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 RC3H2Q9HBD1 1191 aaKnown RBP9.26□□□□□ -0.93
MRPL55-211ENST00000366738 USP15Q9Y4E8 981 aaPredicted RBP9.26□□□□□ -0.93
MRPL55-211ENST00000366738 PCDHGC5Q9Y5F6 944 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 CACNA1GO43497 2377 aa9.26□□□□□ -0.93
MRPL55-211ENST00000366738 GSTTP1A0A1W2PQM5 241 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 PRR23AA6NEV1 266 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 STAM2O75886 525 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 GLP2RO95838 553 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 U2AF2P26368 475 aaKnown RBP eCLIP9.25□□□□□ -0.932e-8■□□□□ 10
MRPL55-211ENST00000366738 TRAF1Q13077 416 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 NEDD9Q14511 834 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 NBR1Q14596 966 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 INF2Q27J81 1249 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
MRPL55-211ENST00000366738 GNPTABQ3T906 1256 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 GALNT17Q6IS24 598 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
MRPL55-211ENST00000366738 RUFY4Q6ZNE9 571 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 NOSTRINQ8IVI9 506 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 SENP7Q9BQF6 1050 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 FOXP1Q9H334 677 aaPredicted RBP9.25□□□□□ -0.93
MRPL55-211ENST00000366738 BRMS1Q9HCU9 246 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 RWDD3Q9Y3V2 267 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 SPTBN2O15020 2390 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 ACACBO00763 2458 aa9.25□□□□□ -0.93
MRPL55-211ENST00000366738 CCDC194A0A1B0GVG4 234 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 CHRNA1P02708 482 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 ITGB1P05556 798 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 GHRP10912 638 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 TCF7P36402 384 aaPredicted RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 NRIP1P48552 1158 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 ARHGAP4P98171 946 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 MGAT3Q09327 533 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 COASYQ13057 564 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 AP3B2Q13367 1082 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 GNL2Q13823 731 aaKnown RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 BTG3Q14201 252 aaPredicted RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 SAFBQ15424 915 aaKnown RBP eCLIP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 FAM26DQ5JW98 314 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 MARCH8Q5T0T0 291 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 RBM23Q86U06 439 aaKnown RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 EFHBQ8N7U6 833 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 CYP2W1Q8TAV3 490 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 BICD2Q8TD16 824 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 TBCKQ8TEA7 893 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 APBB2Q92870 758 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 CLP1Q92989 425 aaKnown RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 PCYT2Q99447 389 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 PLAGL2Q9UPG8 496 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 UBIAD1Q9Y5Z9 338 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 MRPL42Q9Y6G3 142 aaKnown RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 TTC3P53804 2025 aa9.24□□□□□ -0.93
MRPL55-211ENST00000366738 KMT2BQ9UMN6 2715 aaPredicted RBP9.24□□□□□ -0.93
MRPL55-211ENST00000366738 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 PROB1E7EW31 1015 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
MRPL55-211ENST00000366738 CAND2O75155 1236 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 TDP2O95551 362 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 SP100P23497 879 aaPredicted RBP9.23□□□□□ -0.93
MRPL55-211ENST00000366738 MARK3P27448 753 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 SREBF1P36956 1147 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 TOB1P50616 345 aaPredicted RBP9.23□□□□□ -0.93
MRPL55-211ENST00000366738 NONOQ15233 471 aaKnown RBP eCLIP9.23□□□□□ -0.93
MRPL55-211ENST00000366738 PTPN21Q16825 1174 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 XRRA1Q6P2D8 792 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 CRYGNQ8WXF5 182 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 PHF7Q9BWX1 381 aaPredicted RBP9.23□□□□□ -0.93
MRPL55-211ENST00000366738 IRF2BPLQ9H1B7 796 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 GLT8D2Q9H1C3 349 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 EHMT1Q9H9B1 1298 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 CHMP5Q9NZZ3 219 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 FRYLO94915 3013 aa9.23□□□□□ -0.93
MRPL55-211ENST00000366738 PLXNA4Q9HCM2 1894 aa9.22□□□□□ -0.93
MRPL55-211ENST00000366738 SLC37A4O43826 429 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms