RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.87■□□□□ 0.45
NID1-202ENST00000366595 CHRNA3P32297 505 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 IL13P35225 146 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 SLC30A9Q6PML9 568 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 TEKT4Q8WW24 435 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 TRADDQ15628 312 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 ATP6V1G3Q96LB4 118 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 CNBD2Q96M20 576 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
NID1-202ENST00000366595 CEP72Q9P209 647 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 SNX24Q9Y343 169 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 CCNA1P78396 465 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 HIC1Q14526 733 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 APLFQ8IW19 511 aaPredicted RBP17.87■□□□□ 0.45
NID1-202ENST00000366595 KCNV2Q8TDN2 545 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.87■□□□□ 0.45
NID1-202ENST00000366595 PALD1Q9ULE6 856 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 ZNF263O14978 683 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 GOLGA8FQ08AF8 430 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 GOLGA8DPQ0D2H9 430 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 NSUN7Q8NE18 718 aaKnown RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 ZNF555Q8NEP9 628 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 ASNSD1Q9NWL6 643 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 BRAFP15056 766 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 GGCXP38435 758 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 MECOMQ03112 1051 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 KHDRBS2Q5VWX1 349 aaKnown RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 PI4K2BQ8TCG2 481 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 FTOQ9C0B1 505 aaKnown RBP eCLIP17.86■□□□□ 0.45
NID1-202ENST00000366595 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 VPS11Q9H270 941 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 ERBB4Q15303 1308 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 GGPS1O95749 300 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 MMP1P03956 469 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 CALB1P05937 261 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 KCTD2Q14681 263 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.86■□□□□ 0.45
NID1-202ENST00000366595 KDM4CQ9H3R0 1056 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 CAB39Q9Y376 341 aaPredicted RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 CYLC2Q14093 348 aaPredicted RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 RASSF3Q86WH2 238 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 CATSPER3Q86XQ3 398 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 TUBGCP3Q96CW5 907 aa17.86■□□□□ 0.45
NID1-202ENST00000366595 MMTAG2Q9BU76 263 aaKnown RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 SAMSN1Q9NSI8 373 aaKnown RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 KLHL8Q9P2G9 620 aaPredicted RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 MAGED2Q9UNF1 606 aaPredicted RBP17.86■□□□□ 0.45
NID1-202ENST00000366595 PIK3R2O00459 728 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 DIAPH2O60879 1101 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 GOLGA8HP0CJ92 632 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 GTF2IP78347 998 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 CUL4AQ13619 759 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 LRRC41Q15345 812 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 DNAL1Q4LDG9 190 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 ELMSAN1Q6PJG2 1045 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 CEP170P1Q96L14 293 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 C8orf37Q96NL8 207 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 SLITRK6Q9H5Y7 841 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 RUNX1T1Q06455 604 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 ABCB5Q2M3G0 1257 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 PLD3Q8IV08 490 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 C7orf31Q8N865 590 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 ATP11CQ8NB49 1132 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 APOL6Q9BWW8 343 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 ACTN3Q08043 901 aaPredicted RBP17.85■□□□□ 0.45
NID1-202ENST00000366595 KRT72Q14CN4 511 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 TMEM35BQ8NCS4 154 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 RUBCNLQ9H714 662 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 NXF1Q9UBU9 619 aaKnown RBP17.85■□□□□ 0.45
NID1-202ENST00000366595 HABP4Q5JVS0 413 aaKnown RBP17.85■□□□□ 0.45
NID1-202ENST00000366595 PROM2Q8N271 834 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 HEXIM2Q96MH2 286 aaKnown RBP17.85■□□□□ 0.45
NID1-202ENST00000366595 EML4Q9HC35 981 aaKnown RBP17.85■□□□□ 0.45
NID1-202ENST00000366595 FANCAO15360 1455 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 EDC4Q6P2E9 1401 aaKnown RBP17.85■□□□□ 0.45
NID1-202ENST00000366595 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 CLIC2O15247 247 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 CYP27A1Q02318 531 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 CCDC134Q9H6E4 229 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 KIAA1586Q9HCI6 787 aa17.85■□□□□ 0.45
NID1-202ENST00000366595 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
NID1-202ENST00000366595 GPC5P78333 572 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 RABGAP1LQ5R372 815 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 CDR2LQ86X02 465 aaPredicted RBP17.84■□□□□ 0.45
NID1-202ENST00000366595 AGGF1Q8N302 714 aaeCLIP17.84■□□□□ 0.45
NID1-202ENST00000366595 PCDHGB4Q9UN71 923 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 COBLO75128 1261 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 HADHAP40939 763 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 USP14P54578 494 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 KLC1Q07866 573 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 KCNA1Q09470 495 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 BTDP43251 543 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 CNGA3Q16281 694 aa17.84■□□□□ 0.45
NID1-202ENST00000366595 NAALADL2Q58DX5 795 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms