RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 RWDD3Q9Y3V2 267 aa26.59■■□□□ 1.85
SHC1-201ENST00000366442 CCNT1O60563 726 aaKnown RBP26.58■■□□□ 1.85
SHC1-201ENST00000366442 VTNP04004 478 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 STAG3L1P0CL83 205 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 CLCN3P51790 818 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 NFX1Q12986 1120 aaKnown RBP26.58■■□□□ 1.85
SHC1-201ENST00000366442 PPP2R5CQ13362 524 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 TARBP2Q15633 366 aaKnown RBP26.58■■□□□ 1.85
SHC1-201ENST00000366442 AAK1Q2M2I8 961 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 XKR3Q5GH77 459 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 CLP1Q92989 425 aaKnown RBP26.58■■□□□ 1.85
SHC1-201ENST00000366442 TNFRSF25Q93038 417 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 OSMRQ99650 979 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 VAV3Q9UKW4 847 aa26.58■■□□□ 1.85
SHC1-201ENST00000366442 C5orf67F2Z3F1 127 aa26.57■■□□□ 1.84
SHC1-201ENST00000366442 LINC00271P0C7V0 271 aa26.57■■□□□ 1.84
SHC1-201ENST00000366442 TBC1D8BQ0IIM8 1120 aa26.57■■□□□ 1.84
SHC1-201ENST00000366442 PTPROQ16827 1216 aa26.57■■□□□ 1.84
SHC1-201ENST00000366442 EARS2Q5JPH6 523 aaKnown RBP26.57■■□□□ 1.84
SHC1-201ENST00000366442 MRPL38Q96DV4 380 aaKnown RBP26.57■■□□□ 1.84
SHC1-201ENST00000366442 RNF216Q9NWF9 866 aaPredicted RBP26.57■■□□□ 1.84
SHC1-201ENST00000366442 ST3GAL5Q9UNP4 418 aa26.57■■□□□ 1.84
SHC1-201ENST00000366442 AKT3Q9Y243 479 aa26.57■■□□□ 1.84
SHC1-201ENST00000366442 STBD1O95210 358 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 MMP1P03956 469 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 RB1P06400 928 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 SARSP49591 514 aaKnown RBP26.56■■□□□ 1.84
SHC1-201ENST00000366442 PSMC5P62195 406 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 NR5A1Q13285 461 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 BTG3Q14201 252 aaPredicted RBP26.56■■□□□ 1.84
SHC1-201ENST00000366442 C8orf34Q49A92 452 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 LRRC71Q8N4P6 559 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 C1orf112Q9NSG2 853 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 SEPT9Q9UHD8 586 aaPredicted RBP26.56■■□□□ 1.84
SHC1-201ENST00000366442 LIMCH1Q9UPQ0 1083 aa26.56■■□□□ 1.84
SHC1-201ENST00000366442 MUC3AQ02505 3323 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 JAK2O60674 1132 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 NLRP11P59045 1033 aaKnown RBP26.55■■□□□ 1.84
SHC1-201ENST00000366442 ST3GAL1Q11201 340 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 GPM6BQ13491 265 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 FAM228AQ86W67 206 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 CMTR2Q8IYT2 770 aaKnown RBP26.55■■□□□ 1.84
SHC1-201ENST00000366442 HAS1Q92839 578 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 CEP89Q96ST8 783 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 PPP1R16BQ96T49 567 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 ADAMTS10Q9H324 1103 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 RGS18Q9NS28 235 aa26.55■■□□□ 1.84
SHC1-201ENST00000366442 EML1O00423 815 aa26.54■■□□□ 1.84
SHC1-201ENST00000366442 MGEA5O60502 916 aa26.54■■□□□ 1.84
SHC1-201ENST00000366442 BMPR1AP36894 532 aa26.54■■□□□ 1.84
SHC1-201ENST00000366442 TRIM29Q14134 588 aa26.54■■□□□ 1.84
SHC1-201ENST00000366442 HLA-CQ95604 372 aa26.54■■□□□ 1.84
SHC1-201ENST00000366442 IGKV6-21A0A0C4DH24 114 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 DENND3A2RUS2 1198 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 DKC1O60832 514 aaKnown RBP eCLIP26.53■■□□□ 1.84
SHC1-201ENST00000366442 CTNNB1P35222 781 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 CDC42EP1Q00587 391 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 TFF2Q03403 129 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 SLC24A5Q71RS6 500 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 POTEDQ86YR6 584 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 SLFN12Q8IYM2 578 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 BANK1Q8NDB2 785 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 IL27Q8NEV9 243 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 ADAM2Q99965 735 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 C11orf84Q9BUA3 381 aaPredicted RBP26.53■■□□□ 1.84
SHC1-201ENST00000366442 PLVAPQ9BX97 442 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 LRFN2Q9ULH4 789 aa26.53■■□□□ 1.84
SHC1-201ENST00000366442 FAM205CA6NFA0 338 aa26.52■■□□□ 1.84
SHC1-201ENST00000366442 P4HBP07237 508 aaKnown RBP26.52■■□□□ 1.84
SHC1-201ENST00000366442 EIF4BP23588 611 aaKnown RBP26.52■■□□□ 1.84
SHC1-201ENST00000366442 QARSP47897 775 aaKnown RBP26.52■■□□□ 1.84
SHC1-201ENST00000366442 GPC3P51654 580 aa26.52■■□□□ 1.84
SHC1-201ENST00000366442 MTERF2Q49AM1 385 aa26.52■■□□□ 1.84
SHC1-201ENST00000366442 TIGD5Q53EQ6 642 aa26.52■■□□□ 1.84
SHC1-201ENST00000366442 DIS3L2Q8IYB7 885 aaKnown RBP26.52■■□□□ 1.84
SHC1-201ENST00000366442 LLPHQ9BRT6 129 aaKnown RBP26.52■■□□□ 1.84
SHC1-201ENST00000366442 BRWD1Q9NSI6 2320 aa26.52■■□□□ 1.84
SHC1-201ENST00000366442 PCDHB7Q9Y5E2 793 aa26.52■■□□□ 1.84
SHC1-201ENST00000366442 NCOR1O75376 2440 aa26.51■■□□□ 1.84
SHC1-201ENST00000366442 DDX11L8A8MPP1 907 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 BTBD18B2RXH4 712 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 C9IYK1 514 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 MARCH6O60337 910 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 BAG4O95429 457 aaKnown RBP26.51■■□□□ 1.83
SHC1-201ENST00000366442 DSC3Q14574 896 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 ANO5Q75V66 913 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 KIF2CQ99661 725 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 LMAN2LQ9H0V9 348 aa26.51■■□□□ 1.83
SHC1-201ENST00000366442 TMEM150BA6NC51 233 aa26.5■■□□□ 1.83
SHC1-201ENST00000366442 BMP1P13497 986 aa26.5■■□□□ 1.83
SHC1-201ENST00000366442 DNM2P50570 870 aa26.5■■□□□ 1.83
SHC1-201ENST00000366442 FAM189BP81408 668 aa26.5■■□□□ 1.83
SHC1-201ENST00000366442 EPHA7Q15375 998 aa26.5■■□□□ 1.83
SHC1-201ENST00000366442 ZSCAN31Q96LW9 406 aaPredicted RBP26.5■■□□□ 1.83
SHC1-201ENST00000366442 JPH2Q9BR39 696 aaPredicted RBP26.5■■□□□ 1.83
SHC1-201ENST00000366442 PPME1Q9Y570 386 aa26.5■■□□□ 1.83
SHC1-201ENST00000366442 MRPL42Q9Y6G3 142 aaKnown RBP26.5■■□□□ 1.83
SHC1-201ENST00000366442 MAFO75444 373 aaPredicted RBP26.49■■□□□ 1.83
SHC1-201ENST00000366442 DARSP14868 501 aaKnown RBP26.49■■□□□ 1.83
SHC1-201ENST00000366442 SPIRE1Q08AE8 756 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms