RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 PPARGC1AQ9UBK2 798 aaKnown RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 PCSK1NQ9UHG2 260 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 ADGBQ8N7X0 1667 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 GCFC2P16383 781 aaKnown RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 EEF1DP29692 281 aaKnown RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 ATICP31939 592 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 PRCPP42785 496 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 FBXW4P57775 412 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 CC2D2BQ6DHV5 1058 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 SLC7A5P2Q9GIP4 190 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 FAM8A1Q9UBU6 413 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 ADD3Q9UEY8 706 aaKnown RBP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 DCTN4Q9UJW0 460 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 NPHP3-ACAD11A0A0J9YXS1 232 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 K7ERI5 159 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 NPR1P16066 1061 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 CUL4AQ13619 759 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 MDH1BQ5I0G3 518 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 GPR108Q9NPR9 543 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 KLHL11Q9NVR0 708 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
CTNND1-204ENST00000361796 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTNND1-204ENST00000361796 IQANK1A0A1B0GTG1 560 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 POTEB3A0JP26 581 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 POTECB2RU33 542 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 IFNAR1P17181 557 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 PDCD2Q16342 344 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 POTEBQ6S5H4 581 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 TMEM270Q6UE05 265 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 FRA10AC1Q70Z53 315 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 PI4KBQ9UBF8 816 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 CNOT8Q9UFF9 292 aaKnown RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 GGT7Q9UJ14 662 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 FOXN1O15353 648 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 C21orf2O43822 256 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 MKRN4PQ13434 485 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 EPHA10Q5JZY3 1008 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 KDELC2Q7Z4H8 507 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 PIGBQ92521 554 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 SAAL1Q96ER3 474 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 PITPNM3Q9BZ71 974 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 VPS11Q9H270 941 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 RASA4BC9J798 803 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 RASA4O43374 803 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 CCNA1P78396 465 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 CAPRIN1Q14444 709 aaKnown RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 NECTIN1Q15223 517 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 SRRM1Q8IYB3 904 aaKnown RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 CNOT10Q9H9A5 744 aaKnown RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 PRDX5P30044 214 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 NOP14P78316 857 aaKnown RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 NME3Q13232 169 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 ATG16L1Q676U5 607 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 RASSF3Q86WH2 238 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 RAPGEF5Q92565 580 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 C11orf70Q9BRQ4 267 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 TRPV6Q9H1D0 765 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 SLITRK6Q9H5Y7 841 aa8.63□□□□□ -1.03
CTNND1-204ENST00000361796 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 KLHL8Q9P2G9 620 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-204ENST00000361796 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 COPEO14579 308 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 POTEIP0CG38 1075 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 MAGOHP61326 146 aaKnown RBP8.62□□□□□ -1.03
CTNND1-204ENST00000361796 MTMR1Q13613 665 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 POTEGQ6S5H5 508 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 CEP70Q8NHQ1 597 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 NUP85Q9BW27 656 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 ZCWPW1Q9H0M4 648 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 ANGPTL2Q9UKU9 493 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 ZNF233A6NK53 670 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 MAPK13O15264 365 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 PSMD2Q13200 908 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 CCDC144BQ3MJ40 725 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 CRLF3Q8IUI8 442 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 SCN4BQ8IWT1 228 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 CEP19Q96LK0 163 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
CTNND1-204ENST00000361796 ARAP3Q8WWN8 1544 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 GOLGA8QA0A0J9YX86 632 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 GOLGA8OA6NCC3 632 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 GOLGA8NF8WBI6 632 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 ESRRGP62508 458 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 COASYQ13057 564 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 C6orf118Q5T5N4 469 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 ALS2CLQ60I27 953 aa8.62□□□□□ -1.03
CTNND1-204ENST00000361796 CYFIP1Q7L576 1253 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms