RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 NRBP2Q9NSY0 501 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 MAP3K15Q6ZN16 1313 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 KIF23Q02241 960 aaPredicted RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 MXD4Q14582 209 aaPredicted RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 NACC1Q96RE7 527 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 PCDHA13Q9Y5I0 950 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 GJA3Q9Y6H8 435 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 KIAA0586Q9BVV6 1533 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 WASHC5Q12768 1159 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 GOLPH3LQ9H4A5 285 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 ABCF3Q9NUQ8 709 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 FGGP02679 453 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 KITP10721 976 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 CNGA2Q16280 664 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 TRAPPC3LQ5T215 181 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 OLFML2BQ68BL8 750 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 CENPPQ6IPU0 288 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 DCAF15Q66K64 600 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 CYP4F11Q9HBI6 524 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 TBC1D9BQ66K14 1250 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 TGFBRAP1Q8WUH2 860 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 SYBUQ9NX95 663 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 G3BP2Q9UN86 482 aaKnown RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 EIF4A2Q14240 407 aaKnown RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 C1orf228Q6PIY5 440 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 SUPT3HO75486 399 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 HNRNPH2P55795 449 aaKnown RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 FBXO38Q6PIJ6 1188 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 PI4K2BQ8TCG2 481 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 FAF2Q96CS3 445 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 MRPL1Q9BYD6 325 aaKnown RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 KMT5AQ9NQR1 393 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 RNF139Q8WU17 664 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 FOSP01100 380 aaPredicted RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 GCFC2P16383 781 aaKnown RBP9.91□□□□□ -0.82
VPS13A-203ENST00000360280 PSMD2Q13200 908 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 SURF1Q15526 300 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 OTUD7BQ6GQQ9 843 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 NDEL1Q9GZM8 345 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 C19orf44Q9H6X5 657 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 SHROOM2Q13796 1616 aa9.91□□□□□ -0.82
VPS13A-203ENST00000360280 ABCE1P61221 599 aaKnown RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 GPT2Q8TD30 523 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 AKT3Q9Y243 479 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 DTX3LQ8TDB6 740 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 TFAMQ00059 246 aaKnown RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 POLA2Q14181 598 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 SLC9A5Q14940 896 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 SAYSD1Q9NPB0 183 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 LAMC1P11047 1609 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PLEKHG3A1L390 1219 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 GRID2IPA4D2P6 1211 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 UBXN8O00124 270 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 BBS9Q3SYG4 887 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 MAPKAPK5Q8IW41 473 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PNMA1Q8ND90 353 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 ACRBPQ8NEB7 543 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 UBE2TQ9NPD8 197 aaPredicted RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 ATP5JP18859 108 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 ARFIP2P53365 341 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 ANGPT1Q15389 498 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 APOA5Q6Q788 366 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 VSTM4Q8IW00 320 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PCDHGB4Q9UN71 923 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 KIF20BQ96Q89 1820 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 KCNA3P22001 575 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PSMA2P25787 234 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 NUP62P37198 522 aaPredicted RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PDCLQ13371 301 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 DBNDD2Q9BQY9 259 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PARVBQ9HBI1 364 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 CFAP74Q9C0B2 1584 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 CALB1P05937 261 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 TRIP13Q15645 432 aaPredicted RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 DPP8Q6V1X1 898 aaPredicted RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 PLA2G4DQ86XP0 818 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 TRIM54Q9BYV2 358 aa9.9□□□□□ -0.82
VPS13A-203ENST00000360280 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
VPS13A-203ENST00000360280 MAGOHP61326 146 aaKnown RBP9.9□□□□□ -0.83
VPS13A-203ENST00000360280 TCP10Q12799 353 aa9.9□□□□□ -0.83
VPS13A-203ENST00000360280 DNMT1P26358 1616 aaKnown RBP9.9□□□□□ -0.83
VPS13A-203ENST00000360280 DAB2IPQ5VWQ8 1189 aa9.9□□□□□ -0.83
VPS13A-203ENST00000360280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.9□□□□□ -0.83
VPS13A-203ENST00000360280 HADHAP40939 763 aa9.9□□□□□ -0.83
VPS13A-203ENST00000360280 MIS18BP1Q6P0N0 1132 aa9.9□□□□□ -0.83
VPS13A-203ENST00000360280 FAM149B1Q96BN6 582 aa9.9□□□□□ -0.83
VPS13A-203ENST00000360280 KLHL31Q9H511 634 aa9.9□□□□□ -0.83
VPS13A-203ENST00000360280 TAF1DQ9H5J8 278 aaPredicted RBP9.9□□□□□ -0.83
VPS13A-203ENST00000360280 SPTLC3Q9NUV7 552 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms