RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 KCNV1Q6PIU1 500 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ST13P4Q8IZP2 240 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 GDF11O95390 407 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 SFNP31947 248 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 CCT5P48643 541 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 ZC4H2Q9NQZ6 224 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 SEL1LQ9UBV2 794 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 KDM5CP41229 1560 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ANKARQ7Z5J8 1434 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 CYP4F22Q6NT55 531 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 NEO1Q92859 1461 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 EIF2B5Q13144 721 aaKnown RBP10.34□□□□□ -0.75
CUX1-203ENST00000360264 NFU1Q9UMS0 254 aa10.34□□□□□ -0.75
CUX1-203ENST00000360264 ACSL3O95573 720 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 BBS9Q3SYG4 887 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 C1orf146Q5VVC0 180 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 ABHD8Q96I13 439 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 ADD2P35612 726 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 DR1Q01658 176 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 MECOMQ03112 1051 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 KRT27Q7Z3Y8 459 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 STAT3P40763 770 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 APOBEC3FQ8IUX4 373 aaKnown RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 SLC7A5P2Q9GIP4 190 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 DYRK4Q9NR20 520 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 IP6K2Q9UHH9 426 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 SUGT1Q9Y2Z0 365 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 WDR19Q8NEZ3 1342 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 MORF4L2Q15014 288 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 MAPK6Q16659 721 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 TOGARAM2Q6ZUX3 1019 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 RXRBP28702 533 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 AARSP49588 968 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■■■ 51.2
CUX1-203ENST00000360264 TCP11X2Q5H9J9 407 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 LRRC31Q6UY01 552 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 TTLL6Q8N841 843 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 POLIQ9UNA4 740 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 CCDC188H7C350 402 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 PRPF3O43395 683 aaKnown RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 NNTQ13423 1086 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 AP1ARQ63HQ0 302 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 LRRC8BQ6P9F7 803 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 PIGSQ96S52 555 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 MAP3K20Q9NYL2 800 aaKnown RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 TMEM2Q9UHN6 1383 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 GTF2H3Q13889 308 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 HOXC10Q9NYD6 342 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 ARHGAP26Q9UNA1 814 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 ZBBXA8MT70 800 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 ZNF500O60304 480 aaPredicted RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 E2F6O75461 281 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 IMPG1Q17R60 797 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 NHEJ1Q9H9Q4 299 aaPredicted RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 KIAA0391O15091 583 aaKnown RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 MORC4Q8TE76 937 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 TBCKQ8TEA7 893 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 ZNF341Q9BYN7 854 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 FAM129AQ9BZQ8 928 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 MAPKBP1O60336 1514 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 TMPRSS15P98073 1019 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 TFDP2Q14188 446 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 NAF1Q96HR8 494 aaKnown RBP10.33□□□□□ -0.76
CUX1-203ENST00000360264 PCDHGB4Q9UN71 923 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 CLIC4Q9Y696 253 aa10.33□□□□□ -0.76
CUX1-203ENST00000360264 APOA1P02647 267 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.32□□□□□ -0.76
CUX1-203ENST00000360264 SCFD1Q8WVM8 642 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 ARHGAP31Q2M1Z3 1444 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 DOK7Q18PE1 504 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 ALKBH8Q96BT7 664 aaKnown RBP10.32□□□□□ -0.76
CUX1-203ENST00000360264 PPCSQ9HAB8 311 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 AP3M2P53677 418 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 FOPNLQ96NB1 174 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 TRIM55Q9BYV6 548 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 RTTNQ86VV8 2226 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 TRMT10CQ7L0Y3 403 aaKnown RBP10.32□□□□□ -0.76
CUX1-203ENST00000360264 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 PDE11AQ9HCR9 933 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 RAD51Q06609 339 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 OR6B2Q6IFH4 312 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 EPM2AIP1Q7L775 607 aaPredicted RBP10.32□□□□□ -0.76
CUX1-203ENST00000360264 RRM2BQ7LG56 351 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 ULK4Q96C45 1275 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 PPP1R13BQ96KQ4 1090 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 SENP1Q9P0U3 644 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 GOLGA8SH3BPF8 625 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 MARK3P27448 753 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 NCLNQ969V3 563 aa10.32□□□□□ -0.76
CUX1-203ENST00000360264 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms