RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PIK3R2O00459 728 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 MEFVO15553 781 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 SHROOM1Q2M3G4 852 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 OOSP2Q86WS3 158 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 PIK3R5Q8WYR1 880 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 GREM2Q9H772 168 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 KLHL8Q9P2G9 620 aaPredicted RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 ADD3Q9UEY8 706 aaKnown RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 C2CD2LO14523 706 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 MRPS15P82914 257 aaKnown RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 PTH1RQ03431 593 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 SLC44A4Q53GD3 710 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 PARP10Q53GL7 1025 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 BTBD8Q5XKL5 378 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 ATXN7L3BQ96GX2 97 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 ASPSCR1Q9BZE9 553 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 RPRD1BQ9NQG5 326 aaKnown RBP10.44□□□□□ -0.74
CHD3-202ENST00000358181 PARD3Q8TEW0 1356 aa10.44□□□□□ -0.74
CHD3-202ENST00000358181 MYO1GB0I1T2 1018 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 E7EWF7 191 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 HSD3B2P26439 372 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 PAPOLAP51003 745 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 BBS9Q3SYG4 887 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 SPZ1Q9BXG8 430 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 FHDC1Q9C0D6 1143 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 COL17A1Q9UMD9 1497 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 WDR47O94967 919 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 SLCO1A2P46721 670 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 KPNA1P52294 538 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 AP1B1Q10567 949 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 ELF2Q15723 593 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 AKIRIN2Q53H80 203 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 DNAJC24Q6P3W2 148 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 SIK2Q9H0K1 926 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 KIAA0556O60303 1618 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 GOLGA8MH3BSY2 632 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 CYBBP04839 570 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 KCNA2P16389 499 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 PPARAQ07869 468 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 AHI1Q8N157 1196 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 REXO4Q9GZR2 422 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 LUC7L3O95232 432 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 CAVIN2O95810 425 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 DALRD3Q5D0E6 543 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 MFSD14CQ5VZR4 134 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 CAMKK1Q8N5S9 505 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 SNX31Q8N9S9 440 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 KIFC3Q9BVG8 833 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 MED4Q9NPJ6 270 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 KBTBD13C9JR72 458 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 CYTH3O43739 400 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 PEX1O43933 1283 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 GNA14O95837 355 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 POLE2P56282 527 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 POSTNQ15063 836 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 KIZQ2M2Z5 673 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 COBLL1Q53SF7 1204 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 LRRC31Q6UY01 552 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 NT5C3AQ9H0P0 336 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 SBNO1A3KN83 1393 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 H0YCG3 227 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 AFPP02771 609 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 ADORA2BP29275 332 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 SLFN13Q68D06 897 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 TBC1D1Q86TI0 1168 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 NT5DC4Q86YG4 428 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 WDR75Q8IWA0 830 aaKnown RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 DYDC2Q96IM9 177 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 AIPL1Q9NZN9 384 aa10.43□□□□□ -0.74
CHD3-202ENST00000358181 PNMA8BQ9ULN7 279 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
CHD3-202ENST00000358181 A0A0D9SFI3 127 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 ATP1A1P05023 1023 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 FANCCQ00597 558 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 GRAMD1BQ3KR37 738 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 TTLL11Q8NHH1 800 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 DEPDC7Q96QD5 511 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 BBS2Q9BXC9 721 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 NFKBIZQ9BYH8 718 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 PCDHGB4Q9UN71 923 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 SNX5Q9Y5X3 404 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 GRXCR2A6NFK2 248 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 PBLDP30039 288 aaPredicted RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 KDM4CQ9H3R0 1056 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 TLR7Q9NYK1 1049 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 A0A087X0T9 212 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 MT-ND3P03897 115 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 ADAM9Q13443 819 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 CTTNQ14247 550 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 CROCCP2Q86T23 111 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 CHSY1Q86X52 802 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 TRIM42Q8IWZ5 723 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms