RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 PTF1AQ7RTS3 328 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 TAB3Q8N5C8 712 aaPredicted RBP7.4□□□□□ -1.23
RTN4-203ENST00000357376 SLC35G2Q8TBE7 412 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 MDM1Q8TC05 714 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 FNBP1Q96RU3 617 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 EIF2AK1Q9BQI3 630 aaKnown RBP7.4□□□□□ -1.23
RTN4-203ENST00000357376 PI4KBQ9UBF8 816 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 GGT7Q9UJ14 662 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 STK24Q9Y6E0 443 aa7.4□□□□□ -1.23
RTN4-203ENST00000357376 PLEKHG2Q9H7P9 1386 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 THAP12O43422 761 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 KCNMA1Q12791 1236 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 LRRC14Q15048 493 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PTGISQ16647 500 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 INTS8Q75QN2 995 aaKnown RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 FRMD5Q7Z6J6 570 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 GDAP1Q8TB36 358 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 GLG1Q92896 1179 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 MYCBPQ99417 103 aaPredicted RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 TEKT3Q9BXF9 490 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 FGFBP2Q9BYJ0 223 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 AZI2Q9H6S1 392 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 OSGEPQ9NPF4 335 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 HOMER3Q9NSC5 361 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PNMA2Q9UL42 364 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.39□□□□□ -1.23
RTN4-203ENST00000357376 TESPA1A2RU30 521 aaPredicted RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 RASGRF2O14827 1237 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 ALAS1P13196 640 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 FGFR4P22455 802 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 CRKP46108 304 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 SMTNP53814 917 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 AP3B2Q13367 1082 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 UAP1Q16222 522 aaPredicted RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 PPP2R5EQ16537 467 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 XKR9Q5GH70 373 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 SLC10A5Q5PT55 438 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PPP4R3AQ6IN85 833 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 TBC1D1Q86TI0 1168 aaPredicted RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 TRIM59Q8IWR1 403 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 CCDC63Q8NA47 563 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 BAP1Q92560 729 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 TTYH3Q9C0H2 523 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PARP2Q9UGN5 583 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 SPEF2Q9C093 1822 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PASKQ96RG2 1323 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 AKAP3O75969 853 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 GAS8O95995 478 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 IFNB1P01574 187 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 FTLP02792 175 aaPredicted RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 FECHP22830 423 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PON1P27169 355 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 HNRNPH1P31943 449 aaKnown RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 SOX5P35711 763 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 MXI1P50539 228 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PDE6CP51160 858 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 NFIAQ12857 509 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 EDRF1Q3B7T1 1238 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 VSIG1Q86XK7 387 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 MYCBPAPQ8TBZ2 947 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 RFFLQ8WZ73 363 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 RUBCNQ92622 972 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 THOC1Q96FV9 657 aaKnown RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 MTMR9Q96QG7 549 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 UBXN6Q9BZV1 441 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 COA1Q9GZY4 146 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 INTS2Q9H0H0 1204 aaKnown RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 ISCUQ9H1K1 167 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 RIOX1Q9H6W3 641 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 TDRD3Q9H7E2 651 aaKnown RBP7.39□□□□□ -1.23
RTN4-203ENST00000357376 SCN11AQ9UI33 1791 aa7.39□□□□□ -1.23
RTN4-203ENST00000357376 AGPSO00116 658 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 PDXKO00764 312 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 KRT15P19012 456 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 TNNI1P19237 187 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 CASP5P51878 434 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 STAT2P52630 851 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 PMS2P54278 862 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 ERVK-9P63128 1117 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 ECM1Q16610 540 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 KAZNQ674X7 775 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 CYP4F22Q6NT55 531 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 DPH6Q7L8W6 267 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 CYFIP2Q96F07 1278 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 RSRC1Q96IZ7 334 aaKnown RBP7.38□□□□□ -1.23
RTN4-203ENST00000357376 NACC1Q96RE7 527 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 KIF13AQ9H1H9 1805 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 ZNF233A6NK53 670 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 ATMINO43313 823 aaPredicted RBP7.38□□□□□ -1.23
RTN4-203ENST00000357376 ATP5DP30049 168 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 LACTBP83111 547 aaPredicted RBP7.38□□□□□ -1.23
RTN4-203ENST00000357376 SETDB1Q15047 1291 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 WDR44Q5JSH3 913 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 RPUSD2Q8IZ73 545 aaKnown RBP7.38□□□□□ -1.23
RTN4-203ENST00000357376 LRRC15Q8TF66 581 aa7.38□□□□□ -1.23
RTN4-203ENST00000357376 CAVIN3Q969G5 261 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms