RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GAS2O43903 313 aaKnown RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 GFPT2O94808 682 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 IGBP1P78318 339 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 DOT1LQ8TEK3 1739 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 CXCL11O14625 94 aa13.17□□□□□ -0.3
SMAD9-201ENST00000350148 STK10O94804 968 aaKnown RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 EIF4A3P38919 411 aaKnown RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
SMAD9-201ENST00000350148 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 HIP1RO75146 1068 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 GAS8O95995 478 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 KIF11P52732 1056 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 KCNH2Q12809 1159 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 FAM198AQ9UFP1 575 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 PCDHB4Q9Y5E5 795 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 TRIM49BA6NDI0 452 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 MYMKA6NI61 221 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
SMAD9-201ENST00000350148 WNT10BO00744 389 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 SEPT1Q8WYJ6 367 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
SMAD9-201ENST00000350148 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 PCDHA13Q9Y5I0 950 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 ASAP2O43150 1006 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 SORBS3O60504 671 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 VPS18Q9P253 973 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 PLS3P13797 630 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 CASP1P29466 404 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 MYO1EQ12965 1108 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 RBBP5Q15291 538 aaKnown RBP13.16□□□□□ -0.3
SMAD9-201ENST00000350148 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 PCNX4Q63HM2 1172 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
SMAD9-201ENST00000350148 COL18A1P39060 1754 aa13.16□□□□□ -0.3
SMAD9-201ENST00000350148 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 TBXAS1P24557 533 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 HOXD10P28358 340 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 CCDC114Q96M63 670 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 DENND3A2RUS2 1198 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 GCKP35557 465 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 GTF2A2P52657 109 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 ANKRD40Q6AI12 368 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 MTMR14Q8NCE2 650 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 SMARCAD1Q9H4L7 1026 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 MROH8Q9H579 483 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 RAB20Q9NX57 234 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 P4HA2O15460 535 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 COBLO75128 1261 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 CYP3A4P08684 503 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 VAMP7P51809 220 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 DBN1Q16643 649 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 CCDC14Q49A88 953 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 MSH4O15457 936 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 MAGEB2O15479 319 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 CNGA1P29973 690 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 RASSF7Q02833 373 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-201ENST00000350148 NR1I3Q14994 352 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 SLC35F6Q8N357 371 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
SMAD9-201ENST00000350148 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.31
SMAD9-201ENST00000350148 STAT5BP51692 787 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 TATDN1Q6P1N9 297 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
SMAD9-201ENST00000350148 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 TSNARE1Q96NA8 513 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 KCNF1Q9H3M0 494 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 HAUS2Q9NVX0 235 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 CLDN3O15551 220 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 NT5DC1Q5TFE4 455 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 USP50Q70EL3 339 aaPredicted RBP13.14□□□□□ -0.31
SMAD9-201ENST00000350148 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms