RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 METTL21CQ5VZV1 264 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 KLHL7Q8IXQ5 586 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 LRRC34Q8IZ02 419 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 MAML3Q96JK9 1138 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 TPK1Q9H3S4 243 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 SMARCAL1Q9NZC9 954 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 USP42Q9H9J4 1324 aaKnown RBP13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 SNX30Q5VWJ9 437 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 PPP1R21Q6ZMI0 780 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 SCG3Q8WXD2 468 aaKnown RBP13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 TUBGCP5Q96RT8 1024 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 PUS7LQ9H0K6 701 aaKnown RBP13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
CTNNB1-201ENST00000349496 CYTH3O43739 400 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CTDNEP1O95476 244 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CSE1LP55060 971 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 GPR162Q16538 588 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 FMR1NBQ8N0W7 255 aaPredicted RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 PRPF18Q99633 342 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 ZNF304Q9HCX3 659 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 MCF2LO15068 1137 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 TEX33O43247 280 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 ATICP31939 592 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CASP7P55210 303 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 NR1D2Q14995 579 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 GIPC3Q8TF64 312 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CCSER1Q9C0I3 900 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 SAMSN1Q9NSI8 373 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 NMRK1Q9NWW6 199 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 ZMAT5Q9UDW3 170 aaKnown RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 PTPDC1A2A3K4 754 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 RGL2O15211 777 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 SHBGP04278 402 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CHKAP35790 457 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 ARFIP2P53365 341 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 CDK17Q00537 523 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 BTKQ06187 659 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 BRINP3Q76B58 766 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 BPHLQ86WA6 291 aaPredicted RBP13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 BRSK2Q8IWQ3 736 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
CTNNB1-201ENST00000349496 ORC4O43929 436 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 SPATA31D3P0C874 917 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 MXI1P50539 228 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 BIRC3Q13489 604 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 SPATA31D4Q6ZUB0 917 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 NSMCE3Q96MG7 304 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 MAST3O60307 1309 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 MATN2O00339 956 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 STAM2O75886 525 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 DRD4P21917 467 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 PSMD6Q15008 389 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 PDCD4Q53EL6 469 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 GOLM1Q8NBJ4 401 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 SNX25Q9H3E2 840 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 PXDNLA1KZ92 1463 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 MED23Q9ULK4 1368 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 FBP2O00757 339 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 BAG3O95817 575 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 CYLC1P35663 651 aaPredicted RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 RTP1P59025 263 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 C16orf72Q14CZ0 275 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 NLRP9Q7RTR0 991 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 LPIN2Q92539 896 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 FNBP1Q96RU3 617 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 TIPINQ9BVW5 301 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 VPS16Q9H269 839 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 METTL14Q9HCE5 456 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms