RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TFAMQ00059 246 aaKnown RBP11.74□□□□□ -0.53
CLCN6-202ENST00000346436 B4GALNT4Q76KP1 1039 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 CCDC110Q8TBZ0 833 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 SLC7A5P2Q9GIP4 190 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 NDST4Q9H3R1 872 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
CLCN6-202ENST00000346436 SFNP31947 248 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 HMGCS2P54868 508 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 VSNL1P62760 191 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 BTBD8Q5XKL5 378 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 SPATA24Q86W54 205 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 PCSK9Q8NBP7 692 aaKnown RBP11.74□□□□□ -0.53
CLCN6-202ENST00000346436 MOSPD1Q9UJG1 213 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 ZNF185O15231 689 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 CPT1AP50416 773 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 PSPC1Q8WXF1 523 aaKnown RBP11.74□□□□□ -0.53
CLCN6-202ENST00000346436 CUEDC2Q9H467 287 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 RIMBP3CA6NJZ7 1639 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 RIMBP3BA6NNM3 1639 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 RIMBP3Q9UFD9 1639 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 K7ERI5 159 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 HUS1O60921 280 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 CPB1P15086 417 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 NR2F2P24468 414 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 PTPAQ15257 358 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 GBP6Q6ZN66 633 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 TTC25Q96NG3 672 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
CLCN6-202ENST00000346436 CSF1RP07333 972 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TSTA3Q13630 321 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-202ENST00000346436 MAPK6Q16659 721 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 MAN2A1Q16706 1144 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-202ENST00000346436 CCDC127Q96BQ5 260 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 CABS1Q96KC9 395 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TRIM62Q9BVG3 475 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 CNTNAP4Q9C0A0 1308 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 LGALS16A8MUM7 142 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 HOXA2O43364 376 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 MFAP3P55082 362 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 MTMR1Q13613 665 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TMEM47Q9BQJ4 181 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TEX13BQ9BXU2 312 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 RPAP3Q9H6T3 665 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-202ENST00000346436 SAMD15Q9P1V8 674 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 WDR46O15213 610 aaKnown RBP11.73□□□□□ -0.53
CLCN6-202ENST00000346436 GH1P01241 217 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 GFPT1Q06210 699 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-202ENST00000346436 BFSP1Q12934 665 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 ATP2A3Q93084 1043 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 AK8Q96MA6 479 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 A0A1B0GTH6 734 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 CACNB3P54284 484 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 NR1I3Q14994 352 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 REXO1L1PQ8IX06 675 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 TTC39CQ8N584 583 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 LSM7Q9UK45 103 aaKnown RBP11.73□□□□□ -0.53
CLCN6-202ENST00000346436 ESYT3A0FGR9 886 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 STXBP3O00186 592 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 NFRKBQ6P4R8 1299 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 EFHBQ8N7U6 833 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 GDAP1Q8TB36 358 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 RSAD2Q8WXG1 361 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 AP1M1Q9BXS5 423 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 MYOZ2Q9NPC6 264 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 ZNF302Q9NR11 478 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 ADAMTS1Q9UHI8 967 aa11.73□□□□□ -0.53
CLCN6-202ENST00000346436 SPATA31D1Q6ZQQ2 1576 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 GOLGA8KD6RF30 607 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 GGCXP38435 758 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 TTBK2Q6IQ55 1244 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 FBF1Q8TES7 1133 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 FAM84BQ96KN1 310 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 MAP3K14Q99558 947 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 ATP2C1P98194 919 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 AMPD2Q01433 879 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 ARL6IP4Q66PJ3 421 aaKnown RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 UBN1Q9NPG3 1134 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 AMFRQ9UKV5 643 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 HPCAL4Q9UM19 191 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 MEGF6O75095 1541 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 SYNJ2BP-COX16A0A087WUM0 186 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
CLCN6-202ENST00000346436 VPS41P49754 854 aa11.72□□□□□ -0.53
CLCN6-202ENST00000346436 KLK7P49862 253 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms